Annotation Advocacy Roadmap 2011 (Archived): Difference between revisions
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!Soft QC checks (annotations that need to be reviewed but not removed) | !Soft QC checks (annotations that need to be reviewed but not removed) | ||
| GO taxon contraints reviewed for manual annotations in the GOC, format of GO taxon constraints developed (Emily ++) | | GO taxon contraints reviewed for manual annotations in the GOC, format of GO taxon constraints developed (Emily ++) | ||
| | | Stable rules for GO taxon constraints made available | ||
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!Loading other GAF files | !Loading other GAF files | ||
| Document Chris's script on annotation inferences (Emily) | | Document Chris's script on annotation inferences (Emily) | ||
| | | Encourage groups to incorporate inferred annotation sets | ||
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Revision as of 07:47, 26 January 2011
Project | January 2011 | February 2011 | March 2011 | April 2011 | May 2011 | June 2011 | July 2011 | August 2011 | September 2011 | October 2011 | November 2011 | December 2011 |
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Jamborees for Reference Genome | Ongoing | |||||||||||
Outreach to new groups | Outreach to Chinese Hamster proteins group (Emily) | |||||||||||
Enforce annotation guidelines (absolute checks-annotations are wrong) | Phase 1 checks in Production | |||||||||||
Soft QC checks (annotations that need to be reviewed but not removed) | GO taxon contraints reviewed for manual annotations in the GOC, format of GO taxon constraints developed (Emily ++) | Stable rules for GO taxon constraints made available | ||||||||||
Documentation of annotation guidelines | Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) | Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) | Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) | |||||||||
Documentation of evidence code guidelines | Documentation for IAS, IMR, ILD from PAINT (Rama) | Feedback to ECO | Feedback to ECO | |||||||||
GAF file format | Documentation for Col. 16 cell type data (Rachael) | |||||||||||
Loading PAINT GAF files | Call to remind groups to process these files. | |||||||||||
Loading other GAF files | Document Chris's script on annotation inferences (Emily) | Encourage groups to incorporate inferred annotation sets | ||||||||||
Educate curators on ontology development | Signaling talk by Becky Foulger | PAINT and inference annotation pipeline, AmiGO and QuickGO review | ECO?!, GO taxon constraints being used to check annotation files | Metabolic pathway annotation, Annotation QC checks being applied to GAF files | Leave for GOC meeting | |||||||
AmiGO/QuickGO displays | AmiGO: RefGen annotation display, QuickGO: GO term taxon constraints; has_part display |