Annotation Advocacy Roadmap 2011 (Archived)

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Revision as of 07:53, 26 January 2011 by Edimmer (talk | contribs)
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Project January 2011 February 2011 March 2011 April 2011 May 2011 June 2011 July 2011 August 2011 September 2011 October 2011 November 2011 December 2011
Jamborees for Reference Genome Ongoing Preparation for GOC meeting
Outreach to new groups Outreach to Chinese Hamster proteins group (Emily), Inclusion of annotations from NTNU for gastrin gps (Emily) Preparation for GOC meeting
Enforce annotation guidelines (absolute checks-annotations are wrong) Phase 1 checks in Production Preparation for GOC meeting
Soft QC checks (annotations that need to be reviewed but not removed) GO taxon contraints reviewed for manual annotations in the GOC, format of GO taxon constraints developed (Emily ++) Stable rules for GO taxon constraints made available Preparation for GOC meeting
Documentation of annotation guidelines Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) Review top-level organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) Preparation for GOC meeting
Documentation of evidence code guidelines Documentation for IAS, IMR, ILD from PAINT (Rama) Feedback to ECO Feedback to ECO Preparation for GOC meeting
GAF file format Documentation for Col. 16 cell type data (Rachael) Preparation for GOC meeting
Loading PAINT GAF files Call to remind groups to process these files. Preparation for GOC meeting
Loading other GAF files Document Chris's script on annotation inferences (Emily) Encourage groups to incorporate inferred annotation sets Preparation for GOC meeting
Educate curators on ontology development Signaling talk by Becky Foulger PAINT and inference annotation pipeline, AmiGO and QuickGO review ECO?!, GO taxon constraints being used to check annotation files Metabolic pathway annotation, Annotation QC checks being applied to GAF files Preparation for GOC meeting
AmiGO/QuickGO displays AmiGO: RefGen annotation display, QuickGO: GO term taxon constraints QuickGO: has_part display to be improved. QuickGO: ancestor chart display of terms to be removed. Preparation for GOC meeting