Annotation: Difference between revisions

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The purpose of this working group is to outreach to potential annotating groups with a view to getting annotation of maximally feasible quality across all species. The GO endeavours to bring together information about all research species.  
==Purpose==
==Group Leaders==
Emily Dimmer (GOA@UniProt) and Rama Balakrishnan (SGD) with help from Pascale (dictyBase/Ref.genome project).


Within the GO, there are a number of excellent databases annotating model species but we need more manpower to help complete this task. There are also many species that are not being annotated at all yet and so we need to find new annotation groups to cover these species.  
==GO Annotation Camp==
[http://gocwiki.geneontology.org/index.php/2010_GO_camp_Meeting_Logistics 2010 GO Annotation Camp in Geneva, Switzerland, June 16-18 2010 ]
==Activities==
*Educate GOC curators about best annotation practice;
*Enforce annotation rules/policies within GOC
*Maintain the annotation/evidence code documentation
*Train/assist new groups with annotations
*Educate and keep all the annotating groups up-to-date with changes in GAF format
*Keep all curators up-to-date with ontology development and how it affects annotations
 
==Members==
 
 
==Meeting calendar==
 
[[Annotation_08Apr10]]
 
[[Annotation_22Mar10]]
 
[[Annotation_15Mar10]]
 
==Metrics of success==
 
==Process==
 
[http://gocwiki.geneontology.org/index.php/Annotation_Issues_and_Management Annotation Issues]
 
[[Annotation Quality Control Checks]]


Many of these currently unannotated species are less well funded research species that are used to study unusual biological phenomena/processes. Manual annotation of such processes is essential if we are to capture the full range of gene function. This annotation will also allow us to extrapolate information back to the uncharacterised gene products of the reference genomes.


'''Remit and Progress Reports'''<br>
'''Remit and Progress Reports'''<br>

Revision as of 18:36, 14 April 2010

Purpose

Group Leaders

Emily Dimmer (GOA@UniProt) and Rama Balakrishnan (SGD) with help from Pascale (dictyBase/Ref.genome project).

GO Annotation Camp

2010 GO Annotation Camp in Geneva, Switzerland, June 16-18 2010

Activities

  • Educate GOC curators about best annotation practice;
  • Enforce annotation rules/policies within GOC
  • Maintain the annotation/evidence code documentation
  • Train/assist new groups with annotations
  • Educate and keep all the annotating groups up-to-date with changes in GAF format
  • Keep all curators up-to-date with ontology development and how it affects annotations

Members

Meeting calendar

Annotation_08Apr10

Annotation_22Mar10

Annotation_15Mar10

Metrics of success

Process

Annotation Issues

Annotation Quality Control Checks


Remit and Progress Reports
Group summary | Reports | Metrics | Priorities | Meeting minutes

Work in Progress
SOPs in progress
[SOPs in practice]
Standard letters
Future annotation training meetings
Future outreach/advocacy at specific meetings


Outreach Records
[Annotation Community Ontology]
Timezones


Outreach and Advocacy

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