Annotation Conf. Call, June 26, 2012: Difference between revisions

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* Li, Mary - MGI
* Li, Mary - MGI
* Kimberly - Worm
* Kimberly - Worm
* Peter - Reactome


1) Marijn Berg - project on [[improving protein binding annotations using InterPro domains]]
1) Marijn Berg - project on [[improving protein binding annotations using InterPro domains]]
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3) Cell fraction terms
3) Cell fraction terms
Most of us are in agreement to obsolete these terms (http://wiki.geneontology.org/index.php/Annotations_to_Cell_Fraction-type_terms). Please let us know if there are any outstanding issues/concerns. If not we can request the ontology editors to obsolete them.
Most of us are in agreement to obsolete these terms (http://wiki.geneontology.org/index.php/Annotations_to_Cell_Fraction-type_terms). Please let us know if there are any outstanding issues/concerns. If not we can request the ontology editors to obsolete them.


==Discussion==
==Discussion==


1)
1)

Revision as of 11:19, 26 June 2012

Agenda

Present:

  • Rama, Dianna (SGD)
  • Emily, Rachael, Yasmin, Paola, Prudence, Tony, Sandra ORchard, Marijn, Jane- EBI
  • Dong Hui - TAIR
  • Ruth - UCL
  • Li, Mary - MGI
  • Kimberly - Worm
  • Peter - Reactome

1) Marijn Berg - project on improving protein binding annotations using InterPro domains

2) Hard QC check for IKR annotations. Annotations that violate the following rules will be filtered

  • Annotations with IKR ev.code should have NOT qualifier in Column 4
  • Annotations with GO_REF:0000047 should have an ID in column 8 (with/from)

3) Cell fraction terms Most of us are in agreement to obsolete these terms (http://wiki.geneontology.org/index.php/Annotations_to_Cell_Fraction-type_terms). Please let us know if there are any outstanding issues/concerns. If not we can request the ontology editors to obsolete them.

Discussion

1)