Annotation Conf. Call, March 13, 2012: Difference between revisions
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Agenda: | Agenda: | ||
* New documentation for [http://go.termgenie.org/help/index.html TermGenie Help] ([http://go.termgenie.org/ TermGenie tool])(Yasmin) | |||
* Comments for new ISC [http://wiki.geneontology.org/index.php/Evidence_code_for_%27ISS_from_IC_evidence%27 'ISS from IC evidence' evidence code] | |||
** Naming preferences: | |||
- <strike> Inferred from Sequence Similarity, using Curator Judgement</strike> (makes it seem as if the curator is judging an alignment) | |||
- <strike>Inferred by curator based on sequence similarity</strike> (could still be mistaken to mean a curator reviewed a sequence alignment) | |||
- Inferred from Sequence similarity from Curator inferred annotation | |||
- Curator inference transferred based on Sequence Similarity (Susan, Val, Petra, Julie) | |||
' | |||
* Discussion on the appropriate mechanism for filtering out 'redundant annotations' from authoritative GO Consortium annotation files for a specific species. [http://wiki.geneontology.org/index.php/Mechanisms_for_reducing_annotation_redundancy Background available here] | * Discussion on the appropriate mechanism for filtering out 'redundant annotations' from authoritative GO Consortium annotation files for a specific species. [http://wiki.geneontology.org/index.php/Mechanisms_for_reducing_annotation_redundancy Background available here] | ||
* Developing new documentation for IKR, continued from the [http://wiki.geneontology.org/index.php/Annotation_Conf._Call,_January_24,_2012 24th Jan GOC annotation call ] | * Developing new documentation for IKR, continued from the [http://wiki.geneontology.org/index.php/Annotation_Conf._Call,_January_24,_2012 24th Jan GOC annotation call ] | ||
Revision as of 08:34, 13 March 2012
Agenda:
- New documentation for TermGenie Help (TermGenie tool)(Yasmin)
- Comments for new ISC 'ISS from IC evidence' evidence code
- Naming preferences:
- Inferred from Sequence Similarity, using Curator Judgement (makes it seem as if the curator is judging an alignment)
- Inferred by curator based on sequence similarity (could still be mistaken to mean a curator reviewed a sequence alignment)
- Inferred from Sequence similarity from Curator inferred annotation
- Curator inference transferred based on Sequence Similarity (Susan, Val, Petra, Julie)
'
- Discussion on the appropriate mechanism for filtering out 'redundant annotations' from authoritative GO Consortium annotation files for a specific species. Background available here
- Developing new documentation for IKR, continued from the 24th Jan GOC annotation call