Annotation Conf. Call, March 24, 2015: Difference between revisions

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Revision as of 02:16, 24 March 2015

Agenda

Slides from last call, filtering script

I have loaded the slides from last call (GAF pipeline): http://wiki.geneontology.org/index.php/Annotation_Conf._Call,_March_10,_2015
Have added detailed instructions on running the filtering script yourself - http://wiki.geneontology.org/index.php/Annotation_Advocacy_and_Coordination#How_To.3F

Annotation consistency exercise

SGD has selected the following paper for the exercise.
http://www.jbc.org/content/277/32/28439.full
http://www.ncbi.nlm.nih.gov/pubmed/12048186

This is a biochemistry paper and the focus is on 3 genes: TEM1, BFA1, BUB2. There are some col-16 data in this paper.
http://www.yeastgenome.org/locus/TEM1/overview
http://www.yeastgenome.org/locus/BFA1/overview
http://www.yeastgenome.org/locus/BUB2/overview

View annotations at: https://docs.google.com/spreadsheets/d/15ayhyqr7jW1X3kqn6ahiCT21dTC-Bv9ntikFLmXA98Y/edit#gid=0

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Annotation Working Group