Annotation Conf. Call, March 25, 2014

Agenda

GOC meeting report

• miRNA update (Ruth):
• Orion: new tool to build LEGO models (URL: http://go-genkisugi.rhcloud.com/seed/model/gomodel:goa_human-5323da180000002)
• integrating CANTO (community annotation tool developed by Pombase) into the CAF framework to receive annotations from the community
• tool registry
• protein2GO
  • is showing ECO terms that map to the GO 3-letter evidence starting this week (they have plans to allow ECO terms by the end of the year)
  • are working on integrating RNA central and Complex IDs for curation with protein2GO
• GOC new website to be rolled out in April (date TBA). Everybody can get an account in the new Drupal system and make edits to pages (no more SVN co/ci etc)
• jsPAINT prototype -http://amigo2.berkeleybop.org/cgi-bin/amigo2/amigo/phylo_graph
• AmiGO2 has been live for more than a week now. Please check your linkouts.

• SAB meeting highlights:
  • Overall very positive
  • Andrew Su suggested we write small Blog posts on curation practice (how we deal with errors etc) akin to the paper UniProt wrote for the NAR database issue -http://www.ncbi.nlm.nih.gov/pubmed/24622611
  • Very positive about the LEGO tool, Textpresso integration, Paper viewer as a curation tool

E2/E3 SF ticket

http://sourceforge.net/p/geneontology/ontology-requests/10635/

Summary of what is going on with this overhaul: