Annotation Conf. Call 2015-11-10: Difference between revisions
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=Agenda= | =Agenda= | ||
==Deprecated Annotation | ==Deprecated Annotation Extension Relations== | ||
*Please see Rachael's email from 2015-10-25 | |||
*A number of annotation extension relations have been deprecated. Three relations, in particular, have quite a few annotations that need to be updated: | |||
**Dependent_on | |||
**In_presence_of | |||
**In_absence_of | |||
*Guidance for updating annotations is available here: http://wiki.geneontology.org/index.php?title=Guidance_for_updating_deprecated_Annotation_Extension_Relations | |||
*The wiki page also contains a link, at the bottom of the General Guidance section, to a spreadsheet that lists each annotation by Source (curation group) | |||
*Do people have any questions about these updates? | |||
==Entity IDs in Annotation Extensions== | ==Entity IDs in Annotation Extensions== | ||
==Next Curation Consistency Exercise== | ==Next Curation Consistency Exercise== |
Revision as of 17:48, 5 November 2015
Agenda
Deprecated Annotation Extension Relations
- Please see Rachael's email from 2015-10-25
- A number of annotation extension relations have been deprecated. Three relations, in particular, have quite a few annotations that need to be updated:
- Dependent_on
- In_presence_of
- In_absence_of
- Guidance for updating annotations is available here: http://wiki.geneontology.org/index.php?title=Guidance_for_updating_deprecated_Annotation_Extension_Relations
- The wiki page also contains a link, at the bottom of the General Guidance section, to a spreadsheet that lists each annotation by Source (curation group)
- Do people have any questions about these updates?
Entity IDs in Annotation Extensions
Next Curation Consistency Exercise
- 2015-11-24
- TAIR is up next to select a paper
- Continue with consistency exercises in 2016?
- Suggestions for changes or improvements?
- Model each paper in LEGO
- Groups still to select paper: dictyBase, EBI/UniProt, BBOP (Moni?), NextProt, anyone else?