Annotation Conf. Call 2016-06-28: Difference between revisions
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**AE uses has_input or has_direct_input for relation | **AE uses has_input or has_direct_input for relation | ||
**Types of experiments: | **Types of experiments: | ||
*** | ***Yeast two hybrid | ||
***CoIP followed by Western blot | |||
***CoIP followed by mass spec | |||
[[Category: Annotation Working Group]] | [[Category: Annotation Working Group]] |
Revision as of 13:36, 3 June 2016
Bluejeans URL
https://bluejeans.com/993661940
Agenda
Annotation Consistency Exercise
Protein Binding Annotations
- Review Protein Binding Annotation Guidelines
- Use of With/From vs Annotation Extensions
- Annotation of Direct vs Indirect Binding
- Types of Experiments Used to Inform Physical Interactions
- Use Case
- GO:0030674 protein binding, bridging - The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way. Source: GOC:mah, GOC:vw, GOC:bf
- Evidence codes: IDA and IPI
- IPI has With/From, AE, or both With/From and AE
- AE uses has_input or has_direct_input for relation
- Types of experiments:
- Yeast two hybrid
- CoIP followed by Western blot
- CoIP followed by mass spec