Annotation Conf. Call 2016-08-23: Difference between revisions
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| SWD3 | | SWD3 | ||
| GO:1903341 regulation of meiotic DNA | | GO:0010780 meiotic DNA double-strand break formation | ||
| IMP | |||
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| SWD3 | |||
| GO:1903341 regulation of meiotic DNA double-strand break formation | |||
| IMP | | IMP | ||
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| SPP1 | | SPP1 | ||
| GO:1903341 regulation of meiotic DNA | | GO:0010780 meiotic DNA double-strand break formation | ||
| IMP | |||
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| SPP1 | |||
| GO:1903341 regulation of meiotic DNA double-strand break formation | |||
| IMP | | IMP | ||
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| has_direct_input SPO11, occurs_at GO:0035861 site of double-strand break | | has_direct_input SPO11, occurs_at GO:0035861 site of double-strand break | ||
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| SPP1 | |||
| GO:0000790 nuclear chromatin | |||
| IDA | |||
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| coincident_with SO:0000316 CDS | |||
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| SPP1 | |||
| GO:new [condensed?] chromosome axis | |||
| IDA | |||
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| exists_during GO:0051321 meiotic cell cycle | |||
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| SPP1 | |||
| NOT GO:0035861 site of double-strand break | |||
| IDA | |||
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|- | |- | ||
| REC107 (MER2) | | REC107 (MER2) |
Revision as of 09:17, 23 August 2016
Bluejeans URL: https://bluejeans.com/993661940
Agenda
Upcoming Meetings
Next GOC Meeting - USC, Los Angeles, CA, November 4-6, 2016
- Please indicate on the Meeting Logistics Page if you plan to come.
- We are now planning a one-day Noctua/LEGO training session for the Monday (November 7th) following the general consortium meeting. Please indicate on the logistics page if you are definitely staying for that so Paul T. can arrange for a meeting room.
UK LEGO/Noctua Training
- There will be a LEGO/Noctua training session in Hinxton, UK from Wednesday, 8/31 - Friday, 9/2.
- Logistics
- Agenda
Annotation Consistency Exercise
http://www.ncbi.nlm.nih.gov/pubmed/23246437
Gene Name (col 2) | GO ID and term name (col 5) | Evidence (col 7) | With/From (col 8) | Annotation Extension (col 16) |
---|---|---|---|---|
SET1 | GO:0044648 histone H3-K4 dimethylation | IMP | ||
SET1 | GO:0080182 histone H3-K4 trimethylation | IDA | ||
SET1 | GO:0080182 histone H3-K4 trimethylation | IMP | ||
SET1 | GO:0010780 meiotic DNA double-strand break formation | IMP | ||
SET1 | GO:1903341 regulation of meiotic DNA double-strand break formation | IMP | ||
SWD3 | GO:0044648 histone H3-K4 dimethylation | IMP | ||
SWD3 | GO:0080182 histone H3-K4 trimethylation | IMP | ||
SWD3 | GO:0010780 meiotic DNA double-strand break formation | IMP | ||
SWD3 | GO:1903341 regulation of meiotic DNA double-strand break formation | IMP | ||
SPP1 | GO:0044648 histone H3-K4 dimethylation | IMP | ||
SPP1 | GO:0080182 histone H3-K4 trimethylation | IMP | ||
SPP1 | GO:NTR chromosome axis | IDA | happens_during GO:0051321 meiotic cell cycle | |
SPP1 | GO:0003682 chromatin binding | IDA | ||
SPP1 | GO:0010780 meiotic DNA double-strand break formation | IMP | ||
SPP1 | GO:1903341 regulation of meiotic DNA double-strand break formation | IMP | ||
SPP1 | GO:0034613 cellular protein localization | IMP | has_direct_input SPO11, occurs_at GO:0035861 site of double-strand break | |
SPP1 | GO:0000790 nuclear chromatin | IDA | coincident_with SO:0000316 CDS | |
SPP1 | GO:new [condensed?] chromosome axis | IDA | exists_during GO:0051321 meiotic cell cycle | |
SPP1 | NOT GO:0035861 site of double-strand break | IDA | ||
REC107 (MER2) | GO:0034613 cellular protein localization | IMP | happens_during GO:0051321 meiotic cell cycle, has_direct_input SPP1, occurs_at GO:NTR chromosome axis | |
SPO11 | GO:0035861 site of double-strand break | IDA |