Annotation Conf. Call 2016-08-23

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Bluejeans URL: https://bluejeans.com/993661940

Agenda

Upcoming Meetings

Next GOC Meeting - USC, Los Angeles, CA, November 4-6, 2016

  • Please indicate on the Meeting Logistics Page if you plan to come.
  • We are now planning a one-day Noctua/LEGO training session for the Monday (November 7th) following the general consortium meeting. Please indicate on the logistics page if you are definitely staying for that so Paul T. can arrange for a meeting room.

UK LEGO/Noctua Training

  • There will be a LEGO/Noctua training session in Hinxton, UK from Wednesday, 8/31 - Friday, 9/2.
  • Logistics
  • Agenda

Annotation Consistency Exercise

http://www.ncbi.nlm.nih.gov/pubmed/23246437

Gene Name (col 2) GO ID and term name (col 5) Evidence (col 7) With/From (col 8) Annotation Extension (col 16)
SET1 GO:0044648 histone H3-K4 dimethylation IMP
SET1 GO:0080182 histone H3-K4 trimethylation IDA
SET1 GO:0080182 histone H3-K4 trimethylation IMP
SET1 GO:0010780 meiotic DNA double-strand break formation IMP
SET1 GO:1903341 regulation of meiotic DNA double-strand break formation IMP
SWD3 GO:0044648 histone H3-K4 dimethylation IMP
SWD3 GO:0080182 histone H3-K4 trimethylation IMP
SWD3 GO:0010780 meiotic DNA double-strand break formation IMP
SWD3 GO:1903341 regulation of meiotic DNA double-strand break formation IMP
SPP1 GO:0044648 histone H3-K4 dimethylation IMP
SPP1 GO:0080182 histone H3-K4 trimethylation IMP
SPP1 GO:NTR chromosome axis IDA happens_during GO:0051321 meiotic cell cycle
SPP1 GO:0003682 chromatin binding IDA
SPP1 GO:0010780 meiotic DNA double-strand break formation IMP
SPP1 GO:1903341 regulation of meiotic DNA double-strand break formation IMP
SPP1 GO:0034613 cellular protein localization IMP has_direct_input SPO11, occurs_at GO:0035861 site of double-strand break
SPP1 GO:0000790 nuclear chromatin IDA coincident_with SO:0000316 CDS
SPP1 GO:new [condensed?] chromosome axis IDA exists_during GO:0051321 meiotic cell cycle
SPP1 NOT GO:0035861 site of double-strand break IDA
REC107 (MER2) GO:0034613 cellular protein localization IMP happens_during GO:0051321 meiotic cell cycle, has_direct_input SPP1, occurs_at GO:NTR chromosome axis
SPO11 GO:0035861 site of double-strand break IDA