Annotation Conf. Call 2017-01-10: Difference between revisions
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**Relevant github issues: | **Relevant github issues: | ||
***[https://github.com/geneontology/go-site/issues/267 Jenkins GAF checks with red status cannot be inspected] | ***[https://github.com/geneontology/go-site/issues/267 Jenkins GAF checks with red status cannot be inspected] | ||
***[https://github.com/geneontology/go-site/issues/123 GOA annotation checks on GAFs are more stringent than Jenkins checks (should be same?)] | |||
*Inferred Annotations (Annotations Created by Logical Inference) | *Inferred Annotations (Annotations Created by Logical Inference) | ||
**Inter-ontology links | **Inter-ontology links |
Revision as of 16:31, 5 January 2017
Bluejeans
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- to join via phone: enter Meeting ID 993661940 after dialing in
- from US: +1.408.740.7256 or +1.888.240.2560
- from UK: +44.203.608.5256
- from Switzerland: +41.81.588.0256
Agenda
Review of Jenkins Pipeline
- GAF checks
- Inferred Annotations (Annotations Created by Logical Inference)
- Inter-ontology links
- Annotations inferred from annotation extensions
- Source: GOC-OWL
- GOC-OWL inference pipeline concerns
- Evidence Codes used for Inferred Annotations
Working Groups
- At the November 2016 USC meeting, we agreed to establish working groups for several topics.
- If they haven't already, groups need to set up meeting schedule and agendas
- Annotation Guidelines for High Throughput Experiments
- Helen Attrill (FB)
- Stacia Engel (SGD)
- Pascale Gaudet (SIB)
- Ruth Lovering (UCL)
- Kimberly Van Auken (WB)
- Working group to finalize transcription decision tree
- Marcio Acencio (NTNU)
- Karen Christie (MGI)
- Rachael Huntely (UCL)
- Working group to review use of ECO codes
- David Hill (MGI)
- Note also that there is an ECO workshop at this year's ISB meeting
- Annotation Guidelines for High Throughput Experiments