Annotation Conf. Call 2017-08-22: Difference between revisions

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= Meeting URL =
= Meeting URL =
*https://stanford.zoom.us/j/976175422
*https://stanford.zoom.us/j/976175422


= Agenda =  
= Agenda =  

Revision as of 00:15, 18 August 2017

Meeting URL

Agenda

Cambridge Meeting, October, 2017

  • 2017 Cambridge GOC Meeting Logistics
    • Regsitration
  • 2017 Cambridge GOC Meeting Agenda
    • Wednesday afternoon hands-on/workshop session. Suggestions:
      • Creating a biologically useful slim (complete coverage by aspect, biologically useful terms i.e sufficient granularity, avoiding single step process terms (i.e functions), different slims for different purposes.
      • Displaying GO annotations (non redundantly, in MODs, in AmiGO, in AGR), general data presentation.
        • Conventional annotation display as well as GO-CAM model display
      • Good annotation practice: phenotype vs process,
      • Representing biologists’ view of biology: author intent & protein domains; IDA v IC v New evidence code
  • 2017 Cambridge GOC Signalling Workshop

Signaling Project

  • Update on progress to date, github tickets
    • Wnt - Giulia, Helen, Kimberly
    • MAPK - David H. and Sabrina
      • Examining gene products annotated to the process with no experimental support for known MFs
      • Thinking about how to define the beginning and parts of the pathway
    • Ca2+ Signaling
      • Fertilization - Penelope
    • GPCR - Pascale, Petra
      • Some ontology tickets have been addressed
      • Needs global annotation review
      • Needs GO-CAM model
    • Reminder - discussion on specific github tickets, not on project page

Minutes

  • On call: