Annotation Conf. Call 2017-10-24: Difference between revisions
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= Agenda = | = Agenda = | ||
== Annotation QC == | == Annotation QC == | ||
* Manual annotation to uninformative high-level terms | * Manual annotation to uninformative high-level terms is strongly discouraged | ||
** See: [https://github.com/geneontology/go-annotation/issues/1648 improving specificity by banning high level terms #1648] | ** See: [https://github.com/geneontology/go-annotation/issues/1648 improving specificity by banning high level terms #1648] | ||
** Direct annotation to 'transport' (GO:0006810) is one example where a more specific annotation can likely be made | ** Direct annotation to 'transport' (GO:0006810) is one example where a more specific annotation can likely be made | ||
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(2) GR | (2) GR | ||
(1) SynGO | (1) SynGO | ||
*Review action items from signaling workshop and GOC meeting | |||
== Ontology Updates == | |||
* Molecular Function terms describing 'transcription factors' - Pascale | |||
See: [https://github.com/geneontology/go-ontology/issues/13588 Make parent term for transcription factor activity] | |||
*Review key action items from signaling workshop and GOC meeting | |||
= Minutes = | = Minutes = |
Revision as of 09:43, 23 October 2017
Meeting URL
Agenda
Annotation QC
- Manual annotation to uninformative high-level terms is strongly discouraged
- See: improving specificity by banning high level terms #1648
- Direct annotation to 'transport' (GO:0006810) is one example where a more specific annotation can likely be made
- In AmiGO, there are 53 experimentally supported annotations to 'transport'.
- Can groups check these annotations to see if a more granular term is appropriate?
- Annotations according to group:
(8) EcoCyc (7) EcoliWiki (7) MGI (7) PseudoCAP (6) SGD (5) UniProt (4) BHF-UCL (3) RGD (3) TAIR (2) GR (1) SynGO
Ontology Updates
- Molecular Function terms describing 'transcription factors' - Pascale
See: Make parent term for transcription factor activity
- Review key action items from signaling workshop and GOC meeting
Minutes
- On call: