Annotation Conf. Call 2017-10-24: Difference between revisions
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* Manual annotation to uninformative high-level terms is strongly discouraged | * Manual annotation to uninformative high-level terms is strongly discouraged | ||
** See: [https://github.com/geneontology/go-annotation/issues/1648 improving specificity by banning high level terms #1648] | ** See: [https://github.com/geneontology/go-annotation/issues/1648 improving specificity by banning high level terms #1648] | ||
** | ** For example: direct annotation to 'transport' (GO:0006810) is one case where a more specific annotation can likely be made | ||
** In AmiGO, there are 53 experimentally supported annotations to 'transport'. | ** In AmiGO, there are 53 experimentally supported annotations to 'transport'. | ||
** Can groups check these annotations to see if a more granular term is appropriate? | ** Can groups check these annotations to see if a more granular term is appropriate? |
Revision as of 09:44, 23 October 2017
Meeting URL
Agenda
Annotation QC
- Manual annotation to uninformative high-level terms is strongly discouraged
- See: improving specificity by banning high level terms #1648
- For example: direct annotation to 'transport' (GO:0006810) is one case where a more specific annotation can likely be made
- In AmiGO, there are 53 experimentally supported annotations to 'transport'.
- Can groups check these annotations to see if a more granular term is appropriate?
- Annotations according to group:
(8) EcoCyc (7) EcoliWiki (7) MGI (7) PseudoCAP (6) SGD (5) UniProt (4) BHF-UCL (3) RGD (3) TAIR (2) GR (1) SynGO
Ontology Updates
- Molecular Function terms describing 'transcription factors' - Pascale
See: Make parent term for transcription factor activity
GOC Meetings Cambridge
- Review key action items from signaling workshop and GOC meeting
Minutes
- On call: