Annotation Conf. Call 2017-10-24: Difference between revisions
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(2) GR | (2) GR | ||
(1) SynGO | (1) SynGO | ||
** PomBase has a list of >1300 high-level terms that have a 'do not manually annotate' flag | |||
** The proposal is to work through this list so annotations are consistent amongst all GOC members | |||
== Ontology Updates == | == Ontology Updates == |
Revision as of 09:45, 23 October 2017
Meeting URL
Agenda
Annotation QC
- Manual annotation to uninformative high-level terms is strongly discouraged
- See: improving specificity by banning high level terms #1648
- For example: direct annotation to 'transport' (GO:0006810) is one case where a more specific annotation can likely be made
- In AmiGO, there are 53 experimentally supported annotations to 'transport'.
- Can groups check these annotations to see if a more granular term is appropriate?
- Annotations according to group:
(8) EcoCyc (7) EcoliWiki (7) MGI (7) PseudoCAP (6) SGD (5) UniProt (4) BHF-UCL (3) RGD (3) TAIR (2) GR (1) SynGO
- PomBase has a list of >1300 high-level terms that have a 'do not manually annotate' flag
- The proposal is to work through this list so annotations are consistent amongst all GOC members
Ontology Updates
- Molecular Function terms describing 'transcription factors' - Pascale
See: Make parent term for transcription factor activity
GOC Meetings Cambridge
- Review key action items from signaling workshop and GOC meeting
Minutes
- On call: