Annotation Conf. Call 2018-01-09: Difference between revisions
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====Signaling Workshop==== | ====Signaling Workshop==== | ||
In geneontology/go-annotation on github, there is a label 'GO workshop signaling 2017' | In geneontology/go-annotation on github, there is a label 'GO workshop signaling 2017' | ||
====Wnt Signaling Pathway==== | |||
*[https://github.com/geneontology/go-annotation/issues/1736 PAINT:PTN000226268 Wnt signaling pathway to positive regulation of... ] | |||
===Requests for Proposals=== | ===Requests for Proposals=== |
Revision as of 11:15, 8 January 2018
Meeting URL
Agenda
Review of Cambridge meeting action items and milestones for 2018-05 GOC meeting in NYC
In geneontology/go-annotation on github, there is a Milestone '2018-05 GOC meeting'
Annotation Review
HTP Annotations
- Review HTP annotations
- Forward genetic screens - needs clarification
- HTP-types will not be allowed as evidence for ISS+ISO
Signaling Workshop
In geneontology/go-annotation on github, there is a label 'GO workshop signaling 2017'
Wnt Signaling Pathway
Requests for Proposals
Protein Complexes Working Group
- Inferring MF annotations for complex members
- Proposal for guidelines for using contributes_to
- should we really use "colocalizes_with" with cc complex terms
- Protein complex representation in Noctua
- Do we have to hard-code CC complex terms to MF and BP relationships in the ontology?
- Working group established, one meeting in late November
- Next meeting?
Annotation Relations - Cellular Component
- should we really use "colocalizes_with" with cc complex terms
- Relations to describe gene product - component annotation
InterPro2GO Pipeline
- InterPro2GO pipeline
- Need to establish a working group here
Engaging External Experts
Requests for Guidelines
GO-CAM and Noctua
- QC for Noctua models
- New qualifiers for biological processes - including how to deal with legacy annotations
Minutes
- On call: