Annotation Conf. Call 2018-05-22: Difference between revisions
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*[https://github.com/geneontology/go-annotation/issues/1967 Review annotations wrt GO:0090090 'negative regulation of canonical Wnt signaling pathway'] | *[https://github.com/geneontology/go-annotation/issues/1967 Review annotations wrt GO:0090090 'negative regulation of canonical Wnt signaling pathway'] | ||
**Refer to first tab in sheet titled, ALL-CHECK | **Refer to first tab in sheet titled, ALL-CHECK | ||
*[https://github.com/geneontology/go-annotation/issues/1966 Review annotations wrt GO:0060070 'canonical Wnt signaling pathway'] | |||
**Refer to first tab in sheet title, ALL-CHECK | |||
== GOC Meeting - NYC == | == GOC Meeting - NYC == |
Revision as of 16:56, 21 May 2018
Agenda
20th Anniversary GO Meeting, Montreal, Canada
- Dates set for Oct 17-19
Annotation Review
Cyclic nucleotide metabolic process (and child terms)
- Review annotations to GO:0009190 cyclic nucleotide biosynthetic process
- Review annotations to GO:0009187 cyclic nucleotide metabolic process
- Review annotations to GO:0006182 cGMP biosynthetic process
- Review annotations to cAMP catabolic process
- Review annotations to GO:0030820 regulation of cAMP catabolic process and children
Growth
Canonical Wnt Signaling
- Review annotations wrt GO:0090090 'negative regulation of canonical Wnt signaling pathway'
- Refer to first tab in sheet titled, ALL-CHECK
- Review annotations wrt GO:0060070 'canonical Wnt signaling pathway'
- Refer to first tab in sheet title, ALL-CHECK
GOC Meeting - NYC
Minutes
Presentations/Slides
- Presentations and slides are available in the GO's Google drive
- If you presented and your slides are not here, please add them.
Action Items
Curation Decisions
Annotation Survey Results
- We are conducting a survey on annotation practices across the GOC
- Thank you to everyone who responded
- Compiling all of the responses
Ontology Development and Annotation Review
Transcription factor refactoring
- Any updates?
Updates on Projects
MAPK Cascade
Extracellular Matrix
Canonical Wnt Signaling Pathway
- Have compiled annotations to review
- Note: each Google spreadsheet has multiple sheets; please be sure to check each sheet
- Main issues:
- Distinguishing gene products that are involved in canonical Wnt signaling vs +/- regulation of canonical Wnt signaling
- Annotating to more granular child of Wnt signaling pathway when appropriate
- Annotation of downstream targets to the canonical Wnt signaling pathway
GO-CAM/Noctua
- Next call tomorrow, Wednesday, May 23rd at 11:00am EDT (see Google calendar)
Minutes
- On call: