Annotation Conf. Call 2018-08-14: Difference between revisions

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=== ND Annotations ===
=== ND Annotations ===
*[https://github.com/geneontology/go-annotation/issues/2045 Automatic deletion of ND-evidenced annotations]
*[https://github.com/geneontology/go-annotation/issues/2045 Automatic deletion of ND-evidenced annotations]
#ND annotations to a root node term are intended to signify that the curator looked at all available evidence and the MF, BP, or CC of a gene/gene product is not known
#When there is experimental or sequence-based evidence for another GO term from the same aspect, then the ND evidence code should be removed
#GOA proposed to remove ND annotations automatically from their curation database because this was not happening manually
**Note that curators can only update or remove annotations from their respective groups in Protein2GO


=== PAINT Annotations ===
=== PAINT Annotations ===

Revision as of 17:54, 13 August 2018

Meeting URL

Montreal Meeting, October Wednesday, 17th - Friday, 19th

GO Conference Calls

Tuesdays

  • Still will be Tuesdays at 8am PDT
  • Proposed meeting schedule:
    • 1st Tuesday: Alliance Gene Function
    • 2nd Tuesday: GO Consortium
    • 3rd Tuesday: Alliance Gene Function/GO-CAM Working Group
    • 4th Tuesday: GO-CAM Working Group
    • 5th Tuesday: ad hoc, as needed
  • One Zoom URL for all - https://stanford.zoom.us/j/976175422

Annotation Discussion

ND Annotations

  1. ND annotations to a root node term are intended to signify that the curator looked at all available evidence and the MF, BP, or CC of a gene/gene product is not known
  2. When there is experimental or sequence-based evidence for another GO term from the same aspect, then the ND evidence code should be removed
  3. GOA proposed to remove ND annotations automatically from their curation database because this was not happening manually
    • Note that curators can only update or remove annotations from their respective groups in Protein2GO

PAINT Annotations

Annotation Review

  • 84 open annotation review tickets
  • Reminder, generally, to check go-annotation tracker tickets where your group has been assigned and finish up where you can
  • Questions? Please add questions/comments to the individual tickets
  • We can discuss on future calls, if needed