Annotation Conf. Call 2019-01-08: Difference between revisions
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**GO-CAM relations | **GO-CAM relations | ||
**new relations in ontology development, e.g. describing participants in metabolic processes | **new relations in ontology development, e.g. describing participants in metabolic processes | ||
==== PAINT ==== | |||
*Continue curation of families with at least one human gene | |||
*Review families with new or revised experimental annotation | |||
==== Pipeline ==== | ==== Pipeline ==== |
Revision as of 11:55, 7 January 2019
Meeting URL
Agenda
2019 Plans
Annotation Group Priorities
Annotation Review
- Molecular Function refactor
- Transcription
- Annotation to regulation terms - what does GO mean by 'regulation'?
Topic-Specific Projects
- Tie-up an loose ends for existing signaling projects
- GPCR, JAK/STAT, Wnt
- Continue with additional signaling pathways
- Transcription
GO-CAM/Noctua
- Continued discussion of modeling questions
- Generation and use of templates
Documentation
- Relations and their use in annotation and ontology development
- gp2term relations
- GO-CAM relations
- new relations in ontology development, e.g. describing participants in metabolic processes
PAINT
- Continue curation of families with at least one human gene
- Review families with new or revised experimental annotation
Pipeline
- Any questions or issues that groups are having?
- Finalize specs for new gpad/gpi file formats and transition to using these two files for internal consortium data exchange
- Literature tracking system - gather requirements
- Track curation status of papers
- Add comments to papers
Meetings
Conference Calls
- Tuesdays at 8am PDT
- 1st Tuesday: Alliance Biological Function
- 2nd Tuesday: GO Consortium
- 3rd Tuesday: GO-CAM Working Group
- 4th Tuesday: GO-CAM Working Group
- 5th Tuesday: Alliance Biological Function
- One Zoom URL for all - https://stanford.zoom.us/j/976175422
Consortium Meetings
- GOC meeting - Cambridge, UK April 11th - 13th (right after ISB meeting)
- GOC meeting - Berkeley, CA October 7th - 10th ???
- SAB
- GO user's meeting
Working Meetings
- Whole genome import - CA January 28th - February 1st
Minutes
- On call: