Annotation Conf. Call 2019-07-09: Difference between revisions
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* Molecular Function Annotations | * Molecular Function Annotations | ||
** [https://docs.google.com/spreadsheets/d/1xOvmAmg5agQxo11pqYa6sGvbuJhOIyRGkZRjrcZHF8s Protein Dimerization Activity (includes regulation of activity)] | ** [https://docs.google.com/spreadsheets/d/1xOvmAmg5agQxo11pqYa6sGvbuJhOIyRGkZRjrcZHF8s Protein Dimerization Activity (includes regulation of activity)] | ||
** For IC, NAS, and TAS evidence codes, recommend upgrading to an experimentally supported annotation (as per guidelines, e.g. identical protein binding with IPI) or removing | |||
* [https://gitter.im/geneontology/go-annotation Gitter question] from Petra | * [https://gitter.im/geneontology/go-annotation Gitter question] from Petra | ||
Revision as of 09:47, 9 July 2019
Agenda
github submission for InterPro2GO mappings
- Tagging InterPro in issues
- Lorna has requested that we tag InterPro curators so they can be alerted to issues relevant to them (can find relevant gitHub handles on the group-contacts.yaml file: https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv)
- Please also add the InterPro mapping label (always good practice to add labels)
Protein oligomerization terms in GO
- Follow up to 2019-06-11 annotation conference call to review recommendations and actions
- Biological Process Annotations
- Molecular Function Annotations
- Protein Dimerization Activity (includes regulation of activity)
- For IC, NAS, and TAS evidence codes, recommend upgrading to an experimentally supported annotation (as per guidelines, e.g. identical protein binding with IPI) or removing
- Gitter question from Petra
QC Reports
Pipeline Reports
Matrix QC checks
- How is this work going for people?
- Questions, comments?
GO-CAMs and Annotation Extensions
- After USC hackathon in June, we formed a small working group to fully articulate the GO-CAM model specifications
- This will allow uniform QC across workbenches, projects (e.g. Reactome and MOD imports)
- Will also allow us to move forward with harmonizing AE relations used in GO-CAM and conventional annotation
Minutes
- Present: