Annotation Conf. Call 2019-08-20: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
(Created page with "= Agenda = == October GOC Meeting - Berkeley == * [http://wiki.geneontology.org/index.php/2019_Berkeley_GOC_Meeting_Logistics Logistics and Sign-Up] == GO-CAMs and Annota...")
 
Line 12: Line 12:


=== happens_during ===
=== happens_during ===
*happens_during is not defined in the relations ontology
*happens_during is not defined in the [https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002092
*https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002092
relations ontology]
* there is a comment, however:
** X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))


= Minutes =
= Minutes =

Revision as of 10:57, 19 August 2019

Agenda

October GOC Meeting - Berkeley

GO-CAMs and Annotation Extensions

  • After USC hackathon in June, we formed a small working group to fully articulate the GO-CAM model specifications
  • This will allow for consistent GO-CAM curation using Noctua workbenches, import projects (e.g. Reactome and MOD imports)
  • Will also allow us to move forward with harmonizing AE relations used in GO-CAM and conventional annotation

happens_during

relations ontology]
  • there is a comment, however:
    • X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))

Minutes

  • Present: