Annotation Conf. Call 2019-08-20: Difference between revisions
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(Created page with "= Agenda = == October GOC Meeting - Berkeley == * [http://wiki.geneontology.org/index.php/2019_Berkeley_GOC_Meeting_Logistics Logistics and Sign-Up] == GO-CAMs and Annota...") |
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=== happens_during === | === happens_during === | ||
*happens_during is not defined in the | *happens_during is not defined in the [https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002092 | ||
relations ontology] | |||
* there is a comment, however: | |||
** X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y)) | |||
= Minutes = | = Minutes = |
Revision as of 10:57, 19 August 2019
Agenda
October GOC Meeting - Berkeley
GO-CAMs and Annotation Extensions
- After USC hackathon in June, we formed a small working group to fully articulate the GO-CAM model specifications
- This will allow for consistent GO-CAM curation using Noctua workbenches, import projects (e.g. Reactome and MOD imports)
- Will also allow us to move forward with harmonizing AE relations used in GO-CAM and conventional annotation
- On today's call, we will review the annotation extension relations that need further discussion, starting with happens_during
- Google summary spreadsheet of MF extensions
happens_during
- happens_during is not defined in the [https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002092
relations ontology]
- there is a comment, however:
- X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))
Minutes
- Present: