Annotation Conf. Call 2019-08-20

Agenda

October GOC Meeting - Berkeley

• Logistics and Sign-Up

GO-CAMs and Annotation Extensions

• After USC hackathon in June, we formed a small working group to fully articulate the GO-CAM model specifications
• This will allow for consistent GO-CAM curation using Noctua workbenches, import projects (e.g. Reactome and MOD imports)
• Will also allow us to move forward with harmonizing AE relations used in GO-CAM and conventional annotation
  • On today's call, we will review the annotation extension relations that need further discussion, starting with happens_during
  • Google summary spreadsheet of MF extensions

happens_during

• happens_during is not defined in the relations ontology
• There is a comment, however:
  • X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))

Minutes

• Present: