Annotation Conf. Call 2020-01-14: Difference between revisions

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= Agenda =
= Agenda and Minutes =
*Present: David, Edith, Giulia, Harold, Judy, Karen, Kimberly, Laurent-Philippe, Li, Michele, Midori, Petra, Rob, Sabrina, Seth, Suzi, Bob, Petra
 
== Pipeline ==
== Pipeline ==
*gp2protein files
*gp2protein files
**plan is to [https://github.com/geneontology/go-site/issues/400 retire these from GOC], but want to double-check if there is any use for these files that would require GOC to keep them
**plan is to [https://github.com/geneontology/go-site/issues/400 retire these from GOC], but want to double-check if there is any use for these files that would require GOC to keep them
*ACTION: send an announcement that GO will be retiring these files; respond to any issues, as needed


== Noctua Form 2.0 ==
== Noctua Form 2.0 ==
*Demonstration last month
*Demonstration last month
*Available from [http://noctua.geneontology.org/ Noctua landing page] and workbenches menu on graph editor
*Available (SOON!) from [http://noctua.geneontology.org/ Noctua landing page] and workbenches menu on graph editor (NOW)
*[http://wiki.geneontology.org/index.php/Noctua Noctua Manual]
*[http://wiki.geneontology.org/index.php/Noctua Noctua Manual]
*[https://docs.google.com/document/d/1DZu25YKdH_D3Ics5BSmyvN8IGfGlTcCcwQ4HzviZeWM/edit#heading=h.e6msjvy4rdk9 User Guide - Google doc from Berkeley meeting, will be retired]
*[https://docs.google.com/document/d/1DZu25YKdH_D3Ics5BSmyvN8IGfGlTcCcwQ4HzviZeWM/edit#heading=h.e6msjvy4rdk9 User Guide - Google doc from Berkeley meeting, will be retired]
*ACTION: curators should try out the new form, give us feedback; we will continue to update and organize the documentation to try to help with workflow


== MGI and WB Imports into Noctua ==
== MGI and WB Imports into Noctua ==
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**Model annotation history tracking and import
**Model annotation history tracking and import
***Planned f2f meeting of MGI, WB, and GO in February
***Planned f2f meeting of MGI, WB, and GO in February
 
*ACTION: Review annotation history requirements for groups (again) to make sure we're accommodating everyone's needs
= Minutes =
*Present: David, Edith, Giulia, Harold, Judy, Karen, Kimberly, Laurent-Philippe, Li, Michele, Midori, Rob, Sabrina, Seth, Suzi, Bob, Petra




[[Category:Annotation Working Group]]
[[Category:Annotation Working Group]]

Revision as of 12:43, 14 January 2020

Agenda and Minutes

  • Present: David, Edith, Giulia, Harold, Judy, Karen, Kimberly, Laurent-Philippe, Li, Michele, Midori, Petra, Rob, Sabrina, Seth, Suzi, Bob, Petra

Pipeline

  • gp2protein files
    • plan is to retire these from GOC, but want to double-check if there is any use for these files that would require GOC to keep them
  • ACTION: send an announcement that GO will be retiring these files; respond to any issues, as needed

Noctua Form 2.0

MGI and WB Imports into Noctua

  • MGI and WB have addressed any remaining annotation errors
  • Next steps:
    • Incorporate more term-specific relation patterns into the validation schema (ShEx)
    • Model annotation history tracking and import
      • Planned f2f meeting of MGI, WB, and GO in February
  • ACTION: Review annotation history requirements for groups (again) to make sure we're accommodating everyone's needs