Annotation Conf. Call 2020-01-28: Difference between revisions

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Revision as of 16:49, 27 January 2020

Agenda and Minutes

  • Present:

Noctua Form 2.0

  • Software updates made to ensure correct environment of all components
  • Additional updates:
    • Entity identifiers now displayed along with labels (particularly helpful when annotating gene product isoforms)
    • Causal relations decision tree (available via Connect on the Noctua form table)
  • Available (SOON!) from Noctua landing page and workbenches menu on graph editor (NOW)
  • Noctua Manual
  • User Guide - Google doc from Berkeley meeting, will be retired
  • ACTION: curators should try out the new form, give us feedback; we will continue to update and organize the documentation to try to help with workflow

*ACTION: New software updates on Noctua development site will be rolled out to production; Kimberly will email when new Noctua form is on production.

Annotation Relations

  • Goal is to review use of relations across annotations (standard and GO-CAM) and the ontology to ensure consistency wherever possible
  • Review retired relations:
    • 'has direct input' -> 'has input' for MF
    • 'occurs at' -> 'occurs in' for MF
    • annotation tools need to updated

*ACTION: Groups that have these relations in their annotation tools, should remove them.

*ACTION: Commented on existing ticket in RO tracker to obsolete 'has direct input'.