Difference between revisions of "Annotation Conf. Call 2020-03-24"

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(Created page with "= Agenda and Minutes = == GOC Meeting - May 2020 == * Paris meeting scheduled for May 11 - 14th will be held virtually * Please keep the dates open * More details will be for...")
 
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* Paris meeting scheduled for May 11 - 14th will be held virtually
 
* Paris meeting scheduled for May 11 - 14th will be held virtually
 
* Please keep the dates open
 
* Please keep the dates open
* More details will be forthcoming, but overall we are planning for shorter days to accommodate all time zones
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* More details will be forthcoming, but note we are planning for shorter days to accommodate all time zones as best as possible
  
 
== GPAD/GPI 2.0 Specifications ==
 
== GPAD/GPI 2.0 Specifications ==
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**Response:
 
**Response:
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*** Groups should work with UniProt to disambiguate protein records that refer to multiple genes, i.e. generate gene-centric protein entries in UniProt
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*** In the interim, we are working on specific guidelines for these types of entries in the gpi file (just a few relatively small decisions to make but we want entries to be consistent)
  
== Incremental GAF Update ==
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== Status of GAFs ==
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* GAFs will continue to be produced and supported by the GOC into the foreseeable future
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* We would like to propose an incremental update to the GAF, though, to allow for use of the full set of gp2term relations
  
 
= Attendance =
 
= Attendance =
* On call: David, Dmitry, Dustin, Edith, Giulia, Harold, Judy, Karen, Kimberly, Laurent-Philippe, Li, Pascale, Petra, Rob, Sabrina, Seth, Stacia, Suzi A
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* On call:  
  
  
 
[[Category:Annotation Working Group]]
 
[[Category:Annotation Working Group]]

Revision as of 10:57, 23 March 2020

Agenda and Minutes

GOC Meeting - May 2020

  • Paris meeting scheduled for May 11 - 14th will be held virtually
  • Please keep the dates open
  • More details will be forthcoming, but note we are planning for shorter days to accommodate all time zones as best as possible

GPAD/GPI 2.0 Specifications

    • Questions/Comments
      • We need guidelines for how to represent proteins ids or accessions shared by multiple gene products, e.g. histones. [Stacia]
    • Response:
      • Groups should work with UniProt to disambiguate protein records that refer to multiple genes, i.e. generate gene-centric protein entries in UniProt
      • In the interim, we are working on specific guidelines for these types of entries in the gpi file (just a few relatively small decisions to make but we want entries to be consistent)

Status of GAFs

  • GAFs will continue to be produced and supported by the GOC into the foreseeable future
  • We would like to propose an incremental update to the GAF, though, to allow for use of the full set of gp2term relations

Attendance

  • On call: