Annotation Conf. Call 2021-01-19: Difference between revisions
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* [https://docs.google.com/spreadsheets/d/1qNxl7XQl9lSf8NKu55t1-9y4EicIDLjYaoBTtCT1cgs/edit#gid=0 Default GAF 2.2 relations, curation status, tools] | * [https://docs.google.com/spreadsheets/d/1qNxl7XQl9lSf8NKu55t1-9y4EicIDLjYaoBTtCT1cgs/edit#gid=0 Default GAF 2.2 relations, curation status, tools] | ||
* AI: Questions for Seth - testing GAF 2.2 files; groups have put test files in the github ticket | * AI: Questions for Seth - testing GAF 2.2 files; groups have put test files in the github ticket | ||
* AI: Discuss with Seth use of new relations in GPAD 1.2 as a way of moving us forward with GAF 2.2 more efficiently | |||
== Annotation Relations == | == Annotation Relations == |
Revision as of 12:50, 19 January 2021
Agenda and Minutes
GAF 2.2
- Discussion of where each group is at, any remaining issues to address
- Files produced and consumed by groups
- Default GAF 2.2 relations, curation status, tools
- AI: Questions for Seth - testing GAF 2.2 files; groups have put test files in the github ticket
- AI: Discuss with Seth use of new relations in GPAD 1.2 as a way of moving us forward with GAF 2.2 more efficiently
Annotation Relations
- Use of 'has input' in place of 'has regulation target', 'regulates expression of', 'regulates transcription of', regulates translation of'
- AI: create a ticket for updating these relations; set up a separate meeting with Alex to review changes to annotations (and other things, like file formats)
- AI: may need to review other uses of 'has input' on BP relations; Helen will look into her FB spreadsheet for examples to discuss
GOC Meetings
- May - will likely be another virtual meeting
- January 26th - GO-CAM Office Hours
Attendance
- On call: Chris, Colin, David, Debby, Dmitry, Dustin, Edith, Giulia, Harold, Helen, Judy, Karen, Kimberly, Li, Malcolm, Midori, Pascale, Petra, Rob, Sabrina, Stacia, Suzi A, Ruth