Annotation Conf. Call 2021-01-19
Agenda and Minutes
GAF 2.2
- Discussion of where each group is at, any remaining issues to address
- Files produced and consumed by groups
- Default GAF 2.2 relations, curation status, tools
- AI: Questions for Seth - testing GAF 2.2 files; groups have put test files in the GAF 2.2 testing github ticket
- AI: Discuss with Seth use of new relations in GPAD 1.2 as a way of moving us forward with GAF 2.2 more efficiently
Annotation Relations
- Use of 'has input' in place of 'has regulation target', 'regulates expression of', 'regulates transcription of', regulates translation of'
- AI: create a ticket for updating these relations; set up a separate meeting with Alex to review changes to annotations (and other things, like file formats)
- AI: may need to review other uses of 'has input' on AE BP relations, e.g. with signaling pathway terms; Helen will look into her FB spreadsheet for examples to discuss
GOC Meetings
- May - will likely be another virtual meeting
- January 26th - GO-CAM Office Hours
Other issues
- Malcolm raised the issue of formatting for Xenbase gene identifiers in the table for browsing GO-CAMs on the GO site
- AI: add a ticket to the github noctua tracker
Attendance
- On call: Chris, Colin, David, Debby, Dmitry, Dustin, Edith, Giulia, Harold, Helen, Judy, Karen, Kimberly, Li, Malcolm, Midori, Pascale, Petra, Rob, Sabrina, Stacia, Suzi A, Ruth