Annotation Conf. Call October 22, 2013

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Agenda

Highlights from the recent GOC BarHarbor meeting

  • Jenkins email alerts. All the groups submitting a GAF should be getting email alerts about their GAF reports. Please go to: http://build.berkeleybop.org to check your report and please fix the errors
  • GOC website is being moved to Drupal content management system. Editing should be easier with this system (unlike editing in html, checking into SVN etc)
  • AmiGO2: beta version has been available since past July. logistics for moving this to be the production is being worked on. Non-MOD IEAs will be available in AmiGO2
  • Integrating protein binding annotations- a working group will be formed to figure out the details
  • Apoptosis reannotation effort is complete. Curation manual is available
  • Cell Cycle overhaul- val and Jane will give an overview at a future annotation when they are done
  • MF alignment with RHEA
  • There are other Ontology projects (Viral terms, Giardia terms, Uberon/CL/GO alignment etc).
  • Textmining tool into Protein2GO- Kimberley showed how they are able to use textPresso to curate for GO and have them inserted into protein2GO via web services
  • Specs for CAT tool will be drawn by the next GOC meeting, which will be at Texas A&M.
  • Col-16 tutorial outcome