Difference between revisions of "Annotation Extension Relation:has direct input"

From GO Wiki
Jump to: navigation, search
(Annotation Extension Usage Examples)
(Annotation Extension Usage Examples)
Line 9: Line 9:
 
==Annotation Extension Usage Examples==
 
==Annotation Extension Usage Examples==
  
Transcription factor binding to potential targets:
+
''Transcription factor binding to potential target sequences in vitro:'''
  
 
Statement from paper:  By performing gel electrophoretic mobility shift assays, we could detect efficient binding of ATF-2 to the elements found in the bec-1 and lgg-1 promoters (Fig. 5C).  (Note that binding to lin-48 is also reported as a positive control).
 
Statement from paper:  By performing gel electrophoretic mobility shift assays, we could detect efficient binding of ATF-2 to the elements found in the bec-1 and lgg-1 promoters (Fig. 5C).  (Note that binding to lin-48 is also reported as a positive control).

Revision as of 11:48, 25 July 2012

Definition

Identifies an entity directly affected (bound, transported, modified, consumed or destroyed) by the gene product's participation in MF or BP.

Child terms

  • None

Annotation Extension Usage Examples

Transcription factor binding to potential target sequences in vitro:'

Statement from paper: By performing gel electrophoretic mobility shift assays, we could detect efficient binding of ATF-2 to the elements found in the bec-1 and lgg-1 promoters (Fig. 5C). (Note that binding to lin-48 is also reported as a positive control).

Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
WBGene00000220 GO:0001012 RNA polymerase II regulatory region DNA binding PMID:21502138 IDA

has_direct_input(WB:WBGene00000247 bec-1)|has_direct_input(WB:WBGene00002980 lgg-1)|has_direct_input(WB:WBGene00003033 lin-48)

Back to Annotation Extension: Capturing participants