Has output: Difference between revisions

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[[Category:annotation extension]]
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[[Category:LEGO examples]]
[[Category: GO-CAM Relations]]

Revision as of 11:53, 13 April 2019

Back to Annotation usage examples for each annotation extension relation

Definition

Identifies an entity that is changed or created after participation in a molecular function or biological process.

Comment

More details on the limited use of has_output with biological process annotations

Child terms

  • None

Scope of use

Domain

GO:0008150 ! process (Biological Process)

Range

ENTITY_UNION:0000005 ! chemical, gene product, or complex

Annotation Extension Usage Examples

1. FGF production in response to stimulation of protein A


Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
Pxxxx Protein A GO:0090269 fibroblast growth factor production PMID:xxx has_output (UniProt:Q9GZV9 FGF23)

Using examples to demonstrate Folding_and_Unfolding using the relationship has_output

1. FGF production in response to stimulation of protein A

Folded/unfolded DB (Col 2) Object (Col 3) GO ID (Col 5) Reference (Col 6) Extension (Col 16) Parent terms for new folded GO term
Unfolded Pxxxx Protein A GO:0090269 fibroblast growth factor production PMID:xxx has_output (UniProt:Q9GZV9 FGF23)
Folded Pxxxx Protein A New GO term FGF23 fibroblast growth factor cytokine production PMID:xxx is_a GO:0090269 fibroblast growth factor production

OWL class expression: GO:0090269 fibroblast growth factor production AND has_output SOME UniProt:Q9GZV9 FGF23




Back to Annotation usage examples for each annotation extension relation