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Revision as of 11:53, 13 April 2019
Back to Annotation usage examples for each annotation extension relation
Definition
Identifies an entity that is changed or created after participation in a molecular function or biological process.
Comment
More details on the limited use of has_output with biological process annotations
Child terms
- None
Scope of use
Domain
GO:0008150 ! process (Biological Process)
Range
ENTITY_UNION:0000005 ! chemical, gene product, or complex
Annotation Extension Usage Examples
1. FGF production in response to stimulation of protein A
Gene Name (col 2) | GO ID (col 5) | Reference (col 6) | Evidence (col 7) | Annotation Extension (col 16) | |
---|---|---|---|---|---|
Pxxxx | Protein A | GO:0090269 fibroblast growth factor production | PMID:xxx | has_output (UniProt:Q9GZV9 FGF23) |
Using examples to demonstrate Folding_and_Unfolding using the relationship has_output
1. FGF production in response to stimulation of protein A
Folded/unfolded | DB (Col 2) | Object (Col 3) | GO ID (Col 5) | Reference (Col 6) | Extension (Col 16) | Parent terms for new folded GO term |
---|---|---|---|---|---|---|
Unfolded | Pxxxx | Protein A | GO:0090269 fibroblast growth factor production | PMID:xxx | has_output (UniProt:Q9GZV9 FGF23) | |
Folded | Pxxxx | Protein A | New GO term FGF23 fibroblast growth factor cytokine production | PMID:xxx | is_a GO:0090269 fibroblast growth factor production |
OWL class expression: GO:0090269 fibroblast growth factor production AND has_output SOME UniProt:Q9GZV9 FGF23
Back to Annotation usage examples for each annotation extension relation