Annotation Extension Relation:stabilizes: Difference between revisions

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==Annotation Extension Usage Examples==
==Annotation Extension Usage Examples==
{| class="wikitable" border="1"
|-
! Gene Name (col 2)
! GO ID (col 5)
! Reference (col 6)
! Evidence (col 7)
! Annotation Extension (col 16)
|-
| PARK7
| GO:0050821 <span style="color:green">protein stabilization</span>
| PMID:24947010
| IDA
| stabilizes: UniProtKB:P63244 <span style="color:green"> GNB2L1 </span>
|}


== Using examples to demonstrate [[Folding_and_Unfolding]] using the relationship results_in_determination_of ==
{| class="wikitable" border="1"
! Folded/unfolded
!DB (Col 2)
!Object (Col 3)
!GO ID (Col 5)
!Reference (Col 6)
!Extension (Col 16)
!Parent terms for new folded GO term
|-
| Unfolded
| Q99497
| PARK7
| GO:0050821 <span style="color:green">protein stabilization</span>
| PMID: 24947010
| stabilizes: UniProtKB:P63244 <span style="color:green"> GNB2L1 </span>
|
|-
| Folded
| Q99497
| PARK7
| GO:0050821 <span style="color:green">protein stabilization</span>
| PMID: 24947010
| stabilizes: UniProtKB:P63244 <span style="color:green"> GNB2L1 </span>
| <span style="color:red"> No new GO term created </span>
|-
|}
No new term will be created in this example because this is outside of the scope of GO.
'''OWL class expression:''' GO:0050821 <span style="color:red">protein stabilization</span> AND stabilizes SOME UniProtKB:P63244 <span style="color:red">GNB2L1</span>
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Revision as of 06:41, 5 March 2015

Back to Annotation usage examples for each annotation extension relation

Definition

Identifies specific gene product stabilized in a protein stabilization process (or regulation thereof)

Child terms

  • None

Scope of use

Domain

GO:0031647 ! regulation of protein stability

Range

ENTITY_UNION:0000001 ! gene product or complex

Annotation Extension Usage Examples

Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
PARK7 GO:0050821 protein stabilization PMID:24947010 IDA stabilizes: UniProtKB:P63244 GNB2L1

Using examples to demonstrate Folding_and_Unfolding using the relationship results_in_determination_of

Folded/unfolded DB (Col 2) Object (Col 3) GO ID (Col 5) Reference (Col 6) Extension (Col 16) Parent terms for new folded GO term
Unfolded Q99497 PARK7 GO:0050821 protein stabilization PMID: 24947010 stabilizes: UniProtKB:P63244 GNB2L1
Folded Q99497 PARK7 GO:0050821 protein stabilization PMID: 24947010 stabilizes: UniProtKB:P63244 GNB2L1 No new GO term created

No new term will be created in this example because this is outside of the scope of GO.

OWL class expression: GO:0050821 protein stabilization AND stabilizes SOME UniProtKB:P63244 GNB2L1



Back to Annotation usage examples for each annotation extension relation