Annotation Extension Relation Documentation Jamboree: Difference between revisions

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Line 23: Line 23:
|Q8WY54  
|Q8WY54  
|PPM1E  
|PPM1E  
|GO:0035690 <span style="color:green">cellular response to drug</span>  
|GO:0035690 <span style="color:green">cellular response to drugs</span>
|PMID:20801214  
|PMID:20801214  
|IDA
|IDA
|has_input(CHEBI:6801) <span style="color:green">metformin</span>
|has_input(CHEBI:6801 <span style="color:green">metformin</span>)
|-
|-
|O14672  
|O14672  

Revision as of 14:47, 6 June 2014


Documentation pages

http://wiki.geneontology.org/index.php/Annotation_usage_examples_for_each_annotation_extension_relation

http://wiki.geneontology.org/index.php/Folding_and_Unfolding

Issues arising

Folded/Unfolded annotations

  • has_input relationship

would annotations like these ever be folded?

DB (Col 2) Object (Col 3) GO ID (Col 5) Reference (Col 6) Evidence (Col 7) Extension (Col 16)
Q8WY54 PPM1E GO:0035690 cellular response to drugs PMID:20801214 IDA has_input(CHEBI:6801 metformin)
O14672 ADAM10 GO:0006509 membrane protein ectodomain proteolysis PMID:18676862 IMP has_input(UNIPROT:Q29983 MICA)

Other