Annotation Extension Relation Documentation Jamboree: Difference between revisions
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===Folded/Unfolded annotations=== | ===Folded/Unfolded annotations=== | ||
'''1. has_input relationship''' | |||
would annotations like these ever be folded? | would annotations like these ever be folded? | ||
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|- | |- | ||
|} | |} | ||
'''2. When to use has_input relationship and when to use has_regulation_target''' | |||
has_regulation_target is limited to the domain GO:0065007 ! biological regulation | |||
Can has_input be used with the domain GO:0065007 ! biological regulation? | |||
===Other=== | ===Other=== |
Revision as of 14:57, 6 June 2014
Documentation pages
http://wiki.geneontology.org/index.php/Folding_and_Unfolding
Issues arising
Folded/Unfolded annotations
1. has_input relationship would annotations like these ever be folded?
DB (Col 2) | Object (Col 3) | GO ID (Col 5) | Reference (Col 6) | Evidence (Col 7) | Extension (Col 16) |
---|---|---|---|---|---|
Q8WY54 | PPM1E | GO:0035690 cellular response to drugs | PMID:20801214 | IDA | has_input(CHEBI:6801 metformin) |
O14672 | ADAM10 | GO:0006509 membrane protein ectodomain proteolysis | PMID:18676862 | IMP | has_input(UNIPROT:Q29983 MICA) |
2. When to use has_input relationship and when to use has_regulation_target
has_regulation_target is limited to the domain GO:0065007 ! biological regulation
Can has_input be used with the domain GO:0065007 ! biological regulation?