Difference between revisions of "Annotation QC"

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===Incorrect annotations===
 
===Incorrect annotations===
Errors during annotations. How to address this:
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Errors during annotation. How to address this:
 +
See graphs; also queries [[Reference_Genome_Database_Reports]], in particular "non-IEA outliers"
 +
 
 +
 
  
 
Return to [Reference_Genome_Annotation_Project]
 
Return to [Reference_Genome_Annotation_Project]

Revision as of 06:22, 22 January 2008

The purpose of this page is to find methods to check the quality of the GO annotations. There are four types of errors that we would like to find easily:

  1. Omission of annotations
  2. Problems in the ontology
  3. Varying granularity of annotations
  4. Incorrect annotations


Omission of annotations

Problems in the ontology

Varying granularity of annotations

Possible causes:

  • New (more granular) term was created since the annotation was made.

How to address this: Should we warn curator when a more granular term is created an their database have annotations to the parent term?

  • Curator feels they do not have the expertise to annotate a gene.

How to address this: Better communication: SF annotation tracker, email, wiki

Incorrect annotations

Errors during annotation. How to address this: See graphs; also queries Reference_Genome_Database_Reports, in particular "non-IEA outliers"


Return to [Reference_Genome_Annotation_Project]