Annotation usage examples for each annotation extension relation: Difference between revisions
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==Relations== | ==Relations== | ||
[[Annotation_Extension_Relation:acts_on_population_of|acts_on_population_of]] | [[Annotation_Extension_Relation:acts_on_population_of|acts_on_population_of]] - in graph the parent for this term is 'has_participant' | ||
[[Annotation_Extension_Relation:has_agent|has_agent]] | [[Annotation_Extension_Relation:has_agent|has_agent]] - in graph the parent for this term is 'has_participant' | ||
[[Annotation_Extension_Relation:causally_upstream_of|causally_upstream_of]] | [[Annotation_Extension_Relation:causally_upstream_of|causally_upstream_of]] - correct | ||
[[Annotation_Extension_Relation:dependent_on|dependent_on]] | [[Annotation_Extension_Relation:dependent_on|dependent_on]] - not in graph | ||
* [[Annotation_Extension_Relation:localization_dependent_on|localization_dependent_on]] maybe deprecated | * [[Annotation_Extension_Relation:localization_dependent_on|localization_dependent_on]] maybe deprecated - not in graph | ||
* [[Annotation_Extension_Relation:requires_sequence_feature|requires_sequence_feature]] maybe deprecated | * [[Annotation_Extension_Relation:requires_sequence_feature|requires_sequence_feature]] maybe deprecated - not in graph | ||
* [[Annotation_Extension_Relation:requires_substance|requires_substance]] maybe deprecated | * [[Annotation_Extension_Relation:requires_substance|requires_substance]] maybe deprecated - not in graph | ||
[[Annotation_Extension_Relation:exists_during|exists_during]] | [[Annotation_Extension_Relation:exists_during|exists_during]] - correct | ||
[[Annotation_Extension_Relation:happens_during|happens_during]] | [[Annotation_Extension_Relation:happens_during|happens_during]] - correct | ||
[[Annotation_Extension_Relation:has_participant|has_participant]] Not for direct use in annotation extensions! | [[Annotation_Extension_Relation:has_participant|has_participant]] Not for direct use in annotation extensions! - correct | ||
* [[Annotation_Extension_Relation:has_input|has_input]] | * [[Annotation_Extension_Relation:has_input|has_input]] - correct | ||
:* [[Annotation_Extension_Relation:has_direct_input|has_direct_input]] | :* [[Annotation_Extension_Relation:has_direct_input|has_direct_input]] - correct | ||
* [[Annotation_Extension_Relation:has_output|has_output]] | * [[Annotation_Extension_Relation:has_output|has_output]] - correct | ||
* [[Annotation_Extension_Relation:has_regulation_target|has_regulation_target]] | * [[Annotation_Extension_Relation:has_regulation_target|has_regulation_target]] - in graph the parent for this term is 'regulates_o_has_participant', it does not have has_participant' parent | ||
:* [[Annotation_Extension_Relation:regulates_expression_of|regulates_expression_of]] | :* [[Annotation_Extension_Relation:regulates_expression_of|regulates_expression_of]] - in graph the parent for this term is 'regulates_o_has_input' | ||
::* [[Annotation_Extension_Relation:regulates_transcription_of|regulates_transcription_of]] | ::* [[Annotation_Extension_Relation:regulates_transcription_of|regulates_transcription_of]] - correct | ||
::* [[Annotation_Extension_Relation:regulates_translation_of|regulates_translation_of]] | ::* [[Annotation_Extension_Relation:regulates_translation_of|regulates_translation_of]] - correct | ||
* [[Annotation_Extension_Relation:stabilizes|stabilizes]] | * [[Annotation_Extension_Relation:stabilizes|stabilizes]] - in graph the parent for this term is 'has_input' | ||
[[Annotation_Extension_Relation:in_absence_of|in_absence_of]] maybe deprecated | [[Annotation_Extension_Relation:in_absence_of|in_absence_of]] maybe deprecated - not in graph | ||
[[Annotation_Extension_Relation:in_presence_of|in_presence_of]] maybe deprecated | [[Annotation_Extension_Relation:in_presence_of|in_presence_of]] maybe deprecated - not in graph | ||
[[Annotation_Extension_Relation:independent_of|independent_of]] maybe deprecated | [[Annotation_Extension_Relation:independent_of|independent_of]] maybe deprecated- not in graph | ||
[[Annotation_Extension_Relation:occurs_at|occurs_at]] | [[Annotation_Extension_Relation:occurs_at|occurs_at]] - correct | ||
[[Annotation_Extension_Relation:occurs_in|occurs_in]] | [[Annotation_Extension_Relation:occurs_in|occurs_in]] - correct | ||
[[Annotation_Extension_Relation:part_of|part_of]] | [[Annotation_Extension_Relation:part_of|part_of]] - correct | ||
[[Annotation_Extension_Relation:activated_by|activated_by]] | [[Annotation_Extension_Relation:activated_by|activated_by]] - correct | ||
[[Annotation_Extension_Relation:inhibited_by|inhibited_by]] | [[Annotation_Extension_Relation:inhibited_by|inhibited_by]] - correct | ||
[[Annotation_Extension_Relation:results_in_acquisition_of_features_of|results_in_acquisition_of_features_of]] | [[Annotation_Extension_Relation:results_in_acquisition_of_features_of|results_in_acquisition_of_features_of]] - in graph the parent for this term is 'has_participant' | ||
[[Annotation_Extension_Relation:results_in_commitment_to|results_in_commitment_to]] | [[Annotation_Extension_Relation:results_in_commitment_to|results_in_commitment_to]] | ||
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[[Annotation_Extension_Relation:results_in_determination_of|results_in_determination_of]] | [[Annotation_Extension_Relation:results_in_determination_of|results_in_determination_of]] | ||
[[Annotation_Extension_Relation:results_in_development_of|results_in_development_of]] | [[Annotation_Extension_Relation:results_in_development_of|results_in_development_of]] - in graph the parent for this term is 'has_participant' | ||
[[Annotation_Extension_Relation:results_in_movement_of|results_in_movement_of]] | [[Annotation_Extension_Relation:results_in_movement_of|results_in_movement_of]] | ||
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[[Annotation_Extension_Relation:results_in_morphogenesis_of|results_in_morphogenesis_of]] | [[Annotation_Extension_Relation:results_in_morphogenesis_of|results_in_morphogenesis_of]] | ||
[[Annotation_Extension_Relation:results_in_formation_of|results_in_formation_of]] | [[Annotation_Extension_Relation:results_in_formation_of|results_in_formation_of]] - in graph the parent for this term is 'has_output' | ||
[[Annotation_Extension_Relation:results_in_maturation_of|results_in_maturation_of]] | [[Annotation_Extension_Relation:results_in_maturation_of|results_in_maturation_of]] | ||
[[Annotation_Extension_Relation:results_in_division_of|results_in_division_of]] | [[Annotation_Extension_Relation:results_in_division_of|results_in_division_of]] - in graph the parent for this term is 'has_participant' | ||
==Deprecated Relations== | ==Deprecated Relations== | ||
Revision as of 09:00, 15 October 2018
Annotation Extension Relationship graph at EBI
Back to Annotation Extension
Information on Folding and Unfolding
Relations
acts_on_population_of - in graph the parent for this term is 'has_participant'
has_agent - in graph the parent for this term is 'has_participant'
causally_upstream_of - correct
dependent_on - not in graph
- localization_dependent_on maybe deprecated - not in graph
- requires_sequence_feature maybe deprecated - not in graph
- requires_substance maybe deprecated - not in graph
exists_during - correct
happens_during - correct
has_participant Not for direct use in annotation extensions! - correct
- has_input - correct
- has_direct_input - correct
- has_output - correct
- has_regulation_target - in graph the parent for this term is 'regulates_o_has_participant', it does not have has_participant' parent
- regulates_expression_of - in graph the parent for this term is 'regulates_o_has_input'
- regulates_transcription_of - correct
- regulates_translation_of - correct
- stabilizes - in graph the parent for this term is 'has_input'
in_absence_of maybe deprecated - not in graph
in_presence_of maybe deprecated - not in graph
independent_of maybe deprecated- not in graph
occurs_at - correct
occurs_in - correct
part_of - correct
activated_by - correct
inhibited_by - correct
results_in_acquisition_of_features_of - in graph the parent for this term is 'has_participant'
results_in_development_of - in graph the parent for this term is 'has_participant'
results_in_formation_of - in graph the parent for this term is 'has_output'
results_in_division_of - in graph the parent for this term is 'has_participant'