Annotation usage examples for each annotation extension relation: Difference between revisions
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dependent_on | dependent_on | ||
produced_by | produced_by | ||
adjacent_to | adjacent_to |
Revision as of 09:31, 15 October 2018
Annotation Extension Relationship graph at EBI
Back to Annotation Extension
Information on Folding and Unfolding
Relations
acts_on_population_of - in graph the parent for this term is 'has_participant'
has_agent - in graph the parent for this term is 'has_participant'
causally_upstream_of - correct
dependent_on - not in graph
- localization_dependent_on maybe deprecated - not in graph
- requires_sequence_feature maybe deprecated - not in graph
- requires_substance maybe deprecated - not in graph
exists_during - correct
happens_during - correct
has_participant Not for direct use in annotation extensions! - correct
- has_input - correct
- has_direct_input - correct
- has_output - correct
- has_regulation_target - in graph the parent for this term is 'regulates_o_has_participant', it does not have has_participant' parent
- regulates_expression_of - in graph the parent for this term is 'regulates_o_has_input'
- regulates_transcription_of - correct
- regulates_translation_of - correct
- stabilizes - in graph the parent for this term is 'has_input'
in_absence_of maybe deprecated - not in graph
in_presence_of maybe deprecated - not in graph
independent_of maybe deprecated- not in graph
occurs_at - correct
occurs_in - correct
part_of - correct
activated_by - correct
inhibited_by - correct
results_in_acquisition_of_features_of - in graph the parent for this term is 'has_participant'
results_in_commitment_to - correct
results_in_determination_of - correct
results_in_development_of - in graph the parent for this term is 'has_participant'
results_in_movement_of - in graph the parent for this term is 'has_participant'
results_in_specification_of - correct
results_in_morphogenesis_of - in graph the parent for this term is 'has_participant'
results_in_formation_of - in graph the parent for this term is 'has_output'
results_in_maturation_of - in graph the parent for this term is 'has_participant'
results_in_division_of - in graph the parent for this term is 'has_participant'
Deprecated Relations
Relations in Protein2GO graph not in the lists above
dependent_on
produced_by adjacent_to coincident_with has_end_location has_start_location has_target_end_location has_target_start_location regulates
- negatively_regulates
- positively_regulates
- directly_regulates
- directly_negatively_regulates
- directly_positively_regulates