https://wiki.geneontology.org/index.php?title=Apr2006_GO_Ed_report&feed=atom&action=historyApr2006 GO Ed report - Revision history2024-03-28T22:49:22ZRevision history for this page on the wikiMediaWiki 1.40.0https://wiki.geneontology.org/index.php?title=Apr2006_GO_Ed_report&diff=49704&oldid=prevGail at 21:33, 9 April 20142014-04-09T21:33:38Z<p></p>
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</table>Gailhttps://wiki.geneontology.org/index.php?title=Apr2006_GO_Ed_report&diff=8321&oldid=prevMidori at 14:51, 5 March 20072007-03-05T14:51:04Z<p></p>
<p><b>New page</b></p><div>==GO Editorial Office Report - April 2006==<br />
<pre><br />
SourceForge items<br />
Items opened 52<br />
Closed by editorial office 40<br />
(note: 1 SF item closed outside GO-Ed. this month; see end of<br />
report for details and for non-GO-Ed contributors to items we<br />
closed)<br />
Items in progress, assigned to editorial office 74<br />
<br />
See monthly report in CVS for ontology statistics.<br />
<br />
Erika has provided quite a bit of detail on her recent work, which<br />
I'll send around separately.<br />
<br />
Content working group rough draft (Midori, with input from all GO Eds)<br />
<br />
Content topics in progress:<br />
Complete is_a paths for cellular component - update to get back in<br />
sync with 'active' ontology, and almost ready to GO (Jane, with<br />
Chris M)<br />
Morphogenesis (Jen, with dev biol group)<br />
Vasculature (Jen, with dev biol group)<br />
Cell differentiation, general ontology structure (Jen, with dev biol group)<br />
Standard definition for 'maturation' (Jen, with dev biol group)<br />
<br />
Content topics resolved:<br />
Development term definitions: change 'processes' to 'process' (Jen)<br />
Several small things for SourceForge items <br />
<br />
OBO-Edit working group update:<br />
Working group summary (Midori)<br />
User guide progress<br />
IRC April 18 (next: May 4)<br />
Testing beta18<br />
OBO-Edit walkthrough for 'various EBI bods' (Jane)<br />
<br />
Conferences/meetings<br />
Post-St. Croix chats with MA to get overview of action items<br />
BioModels.net Training Camp (organized by Nicolas le Novere, EBI)<br />
General 'Introduction to GO' talk (Midori)<br />
Presentation to GSK (Erika, on her work in the GO Ed. office)<br />
Some planning for upcoming meetings, including neurobiology content<br />
meeting and annotation camp<br />
<br />
Publication<br />
Book chapter in progress: 'Parasites and GO' for bioinformatics text<br />
book for parasitologists (Jane, with Matt Berriman)<br />
<br />
figs2go & ko2go mappings in progress (Jane, with MA on ko2go)<br />
mesh2go mapping under discussion (Jane)<br />
<br />
Annotation outreach (Jen)<br />
Mailing list created for working group<br />
Working group summary<br />
Outreach to 'SEEDS' group<br />
Collaboration set up between GOA and a new annotation group in Italy <br />
Work on Roslin/GOA Chicken Consortium Grant proposal<br />
<br />
Some updates to web pages (Amelia)<br />
<br />
A few queries on the mailing list (mainly Midori)<br />
<br />
GO Bibliography now has 835 entries<br />
<br />
<br />
Appendix 1: input from others on SF items closed this month<br />
<br />
1025157 - many! (This is the 'new look cell cycle entry, on which many<br />
curators and a few PIs commented, both in the SF entry and<br />
by email. Major contributors include Val Wood, Chandra<br />
Theesfeld.)<br />
1427382 (& 1473287) - Becky Foulger, Karen Christie<br />
1428548 - Melissa Haendel, Doug Howe<br />
1435926 - Karen Christie<br />
1446726 - Karen Christie<br />
1472538 - Becky Foulger, Alex Diehl<br />
1476809 - Becky Foulger, David Hill<br />
<br />
Appendix 2: SF items that touch on other OBO ontologies<br />
1428548 - CL<br />
</pre></div>Midori