https://wiki.geneontology.org/index.php?title=Apr2008_ontology_report&feed=atom&action=history
Apr2008 ontology report - Revision history
2024-03-28T23:54:03Z
Revision history for this page on the wiki
MediaWiki 1.40.0
https://wiki.geneontology.org/index.php?title=Apr2008_ontology_report&diff=19418&oldid=prev
Midori at 11:07, 2 April 2009
2009-04-02T11:07:53Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 07:07, 2 April 2009</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l97">Line 97:</td>
<td colspan="2" class="diff-lineno">Line 97:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Combined_Ontology_Development_and_GO_Editorial_Office_reports|Back to list]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Combined_Ontology_Development_and_GO_Editorial_Office_reports|Back to list]]</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">[[Category:Reports]]</ins></div></td></tr>
</table>
Midori
https://wiki.geneontology.org/index.php?title=Apr2008_ontology_report&diff=18570&oldid=prev
Midori: Apr2008 report moved to Apr2008 ontology report: unambiguous name
2009-03-11T16:58:59Z
<p><a href="/Apr2008_report" class="mw-redirect" title="Apr2008 report">Apr2008 report</a> moved to <a href="/Apr2008_ontology_report" title="Apr2008 ontology report">Apr2008 ontology report</a>: unambiguous name</p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<tr class="diff-title" lang="en">
<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 12:58, 11 March 2009</td>
</tr><tr><td colspan="2" class="diff-notice" lang="en"><div class="mw-diff-empty">(No difference)</div>
</td></tr></table>
Midori
https://wiki.geneontology.org/index.php?title=Apr2008_ontology_report&diff=13339&oldid=prev
Midori: New page: Ontology Development & GO Editorial Office Report - March 2008 ===I. Ontology Development=== *SourceForge **Items opened: 76 **Items closed: 67 ***GO Eds: 35 ***MOD curators: 14 (details ...
2008-05-01T15:07:45Z
<p>New page: Ontology Development & GO Editorial Office Report - March 2008 ===I. Ontology Development=== *SourceForge **Items opened: 76 **Items closed: 67 ***GO Eds: 35 ***MOD curators: 14 (details ...</p>
<p><b>New page</b></p><div>Ontology Development & GO Editorial Office Report - March 2008<br />
<br />
===I. Ontology Development===<br />
*SourceForge<br />
**Items opened: 76<br />
**Items closed: 67<br />
***GO Eds: 35<br />
***MOD curators: 14 (details in Appendix 1)<br />
***GO Ed/MOD collaborations: 18 (details in Appendix 2)<br />
**Items still open: 290<br />
***assigned, GO Eds: 59<br />
***assigned, MOD curators: 72<br />
***unassigned: 159 (Note: many of these will be closed on May 12, as agreed at the meeting)<br />
<br />
*Content items resolved<br />
**Sensu work completed!<br />
**Function-process pilot projects on electron transport, glycolysis, and TCA cycle reported at GOC meeting; links will be stored in spreadsheets or text files for the time being<br />
**Lipoprotein-related process and component terms - small collaboration with UCL and Reactome (Midori)<br />
**GO term-taxon pilot project presented at GOC meeting<br />
**Several SourceForge items resolved<br />
<br />
*Content items in progress<br />
**Follow-up to 'regulates' work continues, as noted [[Mar2008_report|last month]].<br />
***Also, Jane looking at 'modulates' terms in light of 'regulates'<br />
**Function-process links for electron transport still being collected<br />
**Signal transduction overhaul continuing<br />
**Additional transport work continuing; new expert participant: Dr Paul Dobson, Manchester Interdisciplinary Biocentre<br />
**Various SourceForge items<br />
<br />
*IMG mapping update in progress (Antonio (EBI) has run mapping tool; Jane evaluating results)<br />
<br />
*[[Ontology_Quality_Control|Ontology QC wiki page]] now available<br />
<br />
See monthly report in CVS for ontology statistics.<br />
<br />
===II. GO Editorial Office activities not represented in part I===<br />
*Amelia is at Berkeley again<br />
<br />
*OBO-Edit working group:<br />
**More bug testing and documentation for OBO-Edit 2.0 (it never ends ...)<br />
**Jen's GUI for obomerge almost ready for testing<br />
<br />
*Advocacy/outreach<br />
**Annotation documentation added<br />
**AmiGO 1.6 - setting priorities<br />
**May newsletter in preparation<br />
**Discussion continuing with Steve Oliver on Aspergillus annotation jamboree<br />
<br />
*Meetings<br />
**GO Consortium meeting (Midori also at Reference Genome meeting)<br />
<br />
*Anything else<br />
**Chapter featuring GO and new AmiGO in "Bioinformatics for Tropical Disease Research: A Practical and Case-Study Approach" (Jane and Matt Berriman; http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=bioinfo.TOC&depth=2)<br />
**Work on InterPro2GO mappings for electron transport (Jen, with InterPro curators and electron transport wg)<br />
**GO bibliography has 1903 entries<br />
<br />
<pre><br />
Appendix 1: MOD curators' SF items<br />
1902160 David<br />
1906309 Karen C, Jim, Val<br />
1912054 David<br />
1913468 David<br />
1934419 David<br />
1943506 Tanya, David<br />
1943514 Tanya, David<br />
1943515 Tanya, David<br />
1943518 Tanya, David<br />
1943857 Tanya, David<br />
1944041 Tanya, David<br />
1944326 Tanya, David<br />
1945401 Karen C<br />
1954489 Tanya, David<br />
<br />
Appendix 2: GO Ed-MOD collaboration SF items - MOD curator(s) involved<br />
1219649 David, Pascale<br />
1674020 many curators<br />
1790306 Peter, Ruth<br />
1846520 David<br />
1852674 Peter, Ruth<br />
1862215 Colin<br />
1912842 several curators<br />
1914443 David Sutherland<br />
1922453 Peter<br />
1924620 Peter, Stacia<br />
1930727 Karen C<br />
1933870 Karen C, Val<br />
1938326 Karen C<br />
1938334 Karen C<br />
1939817 Chris<br />
1942426 Karen C, Val<br />
1943245 Karen C<br />
1946205 Harold<br />
<br />
<br />
(Note: "MOD curator" is shorthand for any non-GO-Ed curator)<br />
</pre><br />
<br />
[[Combined_Ontology_Development_and_GO_Editorial_Office_reports|Back to list]]</div>
Midori