Category:Internal Cross Products: Difference between revisions
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[[Category:Cross Products]] | [[Category:Cross Products]] | ||
== Summary Table == | |||
{|class="wikitable" style="text-align:center border="1" | |||
|+ caption | |||
|- | |||
! | |||
! colspan="2" | dynamic | |||
! colspan="1" | spatial | |||
|- | |||
! | |||
! biological_process | |||
! molecular_function | |||
! cellular_component | |||
|- | |||
! biological_process | |||
| [http://wiki.geneontology.org/index.php/Regulation_cross-products go_xp_regulation][http://wiki.geneontology.org/index.php/XP:biological_process_xp_self biological_process_xp_self] IN | |||
| | |||
| [http://wiki.geneontology.org/index.php/XP:biological_process_xp_cellular_component biological_process_xp_cellular_component] occurs_in IN | |||
|- | |||
! molecular_function | |||
| [http://wiki.geneontology.org/index.php/XP:molecular_function_xp_regulators molecular_function_xp_regulators] IN | |||
| [http://wiki.geneontology.org/index.php/XP:molecular_function_xp_regulators molecular_function_xp_regulators] IN | |||
| | |||
|- | |||
! cellular_component | |||
| [http://wiki.geneontology.org/index.php/XP:cellular_component_xp_go cellular_component_xp_go] TODO | |||
| [http://wiki.geneontology.org/index.php/XP:cellular_component_xp_go cellular_component_xp_go] TODO | |||
| [http://wiki.geneontology.org/index.php/XP:cellular_component_xp_self cellular_component_xp_self] part_of IN | |||
|} |
Latest revision as of 01:36, 6 July 2011
Internal cross-products are those cross-products (i.e. logical definitions) that reference only classes within the GO.
Examples:
- nucleotide-excision repair complex (CC*BP)
- ribonuclease MRP complex (CC*BP)
- T cell activation during immune response (BP*BP)
- negative regulation of X (BP*BP) -- see Category:Regulation
Counter-examples:
- heart development (refers to a term from an AO)
- T cell activation (refers to a term from CL)
Note that T cell activation during immune response counts as internal, as it can be immediately defined purely in terms of BPs (T-cell activation and immune response). It is also an example of a nested logical definition, as the genus component of the definition can be defined using external classes (CL)
Using the internal xps
You can use each internal xp file individually (see list below)
Alternatively, you can use the go_xp_internal-imports file in the scratch/xps dir. This contains links to each individual XP file.
Summary Table
dynamic | spatial | ||
---|---|---|---|
biological_process | molecular_function | cellular_component | |
biological_process | go_xp_regulationbiological_process_xp_self IN | biological_process_xp_cellular_component occurs_in IN | |
molecular_function | molecular_function_xp_regulators IN | molecular_function_xp_regulators IN | |
cellular_component | cellular_component_xp_go TODO | cellular_component_xp_go TODO | cellular_component_xp_self part_of IN |
Pages in category "Internal Cross Products"
The following 13 pages are in this category, out of 13 total.