Cellular component processes: Difference between revisions
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Would people definately think of the processing of a | |||
peptide as part of the biosynthetic process? I can see that it would be | peptide as part of the biosynthetic process? I can see that it would be | ||
part of the 'biogenesis of the complex', but not part of its biosynthesis. | part of the 'biogenesis of the complex', but not part of its biosynthesis. | ||
I would think of biogenesis as including the processing and modification | I would think of biogenesis as including the processing and modification | ||
and assembly, but biosynthesis as the 'formation' | and assembly, but biosynthesis as the 'formation' | ||
would this make sense? (prerhaps not...) | |||
would this make sense? | |||
*organization/morphogenesis (if part of development) | *organization/morphogenesis (if part of development) | ||
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but that macromolecule biogenesis would not. | but that macromolecule biogenesis would not. | ||
I am looking at the children of 'macromolecule biosynthetic proces's, and they all appear to be cellular. | I am looking at the children of 'macromolecule biosynthetic proces's, and they all appear to be cellular. | ||
Although a lot don't currently have this | Although a lot don't currently have this parent. | ||
Check out hemoglobin biosynthestic process, which has | Check out hemoglobin biosynthestic process, which has cellular process and biosynthesis process, but not cellular biosynthestic process. | ||
Revision as of 04:33, 11 July 2008
At the meeting on July 9, 2008, we identified thins to be done on processes affecting cellular components. This is a rough list of action items.
Personnel: Jane, David, Midori, Val, others as needed (e.g. Jen, Tanya for plant meristem terms)
Timeframe: late July or early August 2008??
To do:
- Rename all "organization and biogenesis" terms: remove "and biogenesis".
- Split CC maintenance terms out so that no maintenance term is under development. Obsolete or rename "assembly and maintenance" terms.
- Look at all maintenance terms to see whether they should have homeostasis parent/ancestor.
Notes:
cellular component organization [and biogenesis] covers CC morphogenesis and CC maintenance
the meaning is essentially "a process that affects a cellular component"; can we come up with a better name? (rejected "cellular component process" as too vague)
Also (tangential):
- Check for any stray "and" terms. Split, rename, etc. as appropriate.
- Rename the few remaining "and/or" terms to use "or."
Would people definately think of the processing of a
peptide as part of the biosynthetic process? I can see that it would be part of the 'biogenesis of the complex', but not part of its biosynthesis. I would think of biogenesis as including the processing and modification and assembly, but biosynthesis as the 'formation' would this make sense? (prerhaps not...)
- organization/morphogenesis (if part of development)
- biogenesis
- biosynthtic/formation (biosynthesis would have a cellular process parent)
- assembly
- modification/processing
- disassembly
- catabolism
- biogenesis
- maintenance
I'm thinking that macromolecule biosynthestic process (which is a metabolic process) would be a cellular process, but that macromolecule biogenesis would not. I am looking at the children of 'macromolecule biosynthetic proces's, and they all appear to be cellular. Although a lot don't currently have this parent. Check out hemoglobin biosynthestic process, which has cellular process and biosynthesis process, but not cellular biosynthestic process.