Content Meeting Participants Information: Difference between revisions

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http://www.geneontology.org/GO.sourceforge.links.shtml
http://www.geneontology.org/GO.sourceforge.links.shtml


Term requests go through the 'GO curator requests tracker' and annotation ideas should go through the 'GO annotation tracker'.
*Term requests: 'GO curator requests tracker'.
*Annotation ideas: 'GO annotation tracker'.
 
You will see below that there are many other useful links on this page but the ones you might need are explained in more detail below.  
You will see below that there are many other useful links on this page but the ones you might need are explained in more detail below.  



Revision as of 10:00, 30 July 2007

This page gives some introductory information for content meeting participants who may wish to carry on looking at the ontologies and thinking about annotation after the meeting is finished.


The Gene Ontology Project Website

http://www.geneontology.org/

The Teaching Resources Page

This page contains all of our recent teaching materials and so provides an easy way into learning about GO.
http://www.geneontology.org/GO.teaching.resources.shtml

Send Us Your Ideas

If you would like to send us requests for new GO terms, or if you have annotations contribute you can visit this page: http://www.geneontology.org/GO.sourceforge.links.shtml

*Term requests: 'GO curator requests tracker'.
*Annotation ideas: 'GO annotation tracker'.

You will see below that there are many other useful links on this page but the ones you might need are explained in more detail below.

AmiGO

AmiGO is a browser that allows you to view the Gene Ontologies and annotations online.

http://amigo.geneontology.org/cgi-bin/amigo/go.cgi

Recent tutorial:
http://www.geneontology.org/teaching_resources/tutorials/2006-03_pombe-workshop_AmiGO_jlomax.ppt

OBO-Edit

All information on OBO-Edit can be found here:
http://oboedit.org/
  • Muscle meeting ontology file:

http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/scratch/gene_ontology_cardio.obo The latest version is at the top of the list.

  • OBO-Edit tutorial in Italian:

http://www.geneontology.org/teaching_resources/tutorials/2007-04_italian_oboedit_tutorial.ppt

  • Very extensive help guide in English is included in the Application.
Graphviewer
To view the ontology as a graph, as in the picture above you will also need to install graphviz. http://www.graphviz.org/ Read the section of the help guide called 'The Graph Viewer Plugin: Configuring the Plugin' for more details of you to set it up.