Content Meeting Participants Information

Grading of Options

 Quick and Easy

 Technical or Time-consuming

The Gene Ontology Project Website

http://www.geneontology.org/

AmiGO

AmiGO is a browser that allows you to view the Gene Ontologies and annotations online.

http://amigo.geneontology.org/cgi-bin/amigo/go.cgi

Recent tutorial:
http://www.geneontology.org/teaching_resources/tutorials/2006-03_pombe-workshop_AmiGO_jlomax.ppt

The Teaching Resources Page *

This page contains all of our recent teaching materials and so provides an easy way into learning about GO.
http://www.geneontology.org/GO.teaching.resources.shtml

Send Us Your Ideas

Option 1

You can send your ideas for new GO terms or annotations directly to us by e-mail:

Midori: midori at ebi.ac.uk
Jennifer: jdeegan at ebi.ac.uk

Or via the GO-Help system: go-help at geneontology.org

Option 2

Alternatively you can enter your suggestions in the online tracker systems which are linked from:
http://www.geneontology.org/GO.sourceforge.links.shtml

For Term requests use 'GO curator requests tracker'.
For Annotation ideas use 'GO annotation tracker'.

The advantage of using this system is that you can then easily take part in online discussions amongst the GO Consortium staff, and you will be automatically notified as terms are added.

OBO-Edit

All information on OBO-Edit can be found here:

http://oboedit.org/

• Muscle meeting ontology file:

http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/scratch/gene_ontology_cardio.obo The latest version is at the top of the list.

• OBO-Edit tutorial in Italian:
  

http://www.geneontology.org/teaching_resources/tutorials/2007-04_italian_oboedit_tutorial.ppt

• Very extensive help guide in English is included in the Application.

Graphviewer

To view the ontology as a graph, as in the picture above you will also need to install graphviz. 
http://www.graphviz.org/
Read the section of the help guide called 'The Graph Viewer Plugin: Configuring the Plugin' for more details of you to set it up.