Adding or Deleting Asserted Subclasses: Difference between revisions

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''See [[Ontology_Editors_Daily_Workflow]] for creating branches and basic Protégé instructions.''
  See [[Ontology_Editors_Daily_Workflow]] for creating branches and basic Protégé instructions.




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* Make sure to run the Reasoner to check that the asserted parent is now replaced with the correct reasoned parent(s).
* Make sure to run the Reasoner to check that the asserted parent is now replaced with the correct reasoned parent(s).


''See [[Ontology_Editors_Daily_Workflow]] for commit, push and merge instructions.''
  See [[Ontology_Editors_Daily_Workflow]] for commit, push and merge instructions.




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Last reviewed: June 7, 2018
Last reviewed: June 7, 2018
[http://wiki.geneontology.org/index.php/Ontology_Editing_Guide Back to: Ontology Editing Guide]
[http://wiki.geneontology.org/index.php/Ontology_Editing_Guide Back to: Ontology Editing Guide]


[[Category:GO Editors]][[Category:Ontology]][[Category:Editor_Guide_2018]]
[[Category:GO Editors]][[Category:Ontology]][[Category:Editor_Guide_2018]]

Revision as of 20:05, 7 June 2018

 See Ontology_Editors_Daily_Workflow for creating branches and basic Protégé instructions.


  • Asserted is_a parents do not need to be retained as entries in the SubClass of section of the Description window in Protege if the logical definition for a term results in their inference.
  • If you have created a logical definition for your term, you can delete the asserted is_a parent by clicking on the X to the right term.
  • Once you synchronize the Reasoner, you will see the reasoned classification of your new term, including the inferred is_a parent(s).
  • If the inferred classification does not contain the correct parentage, or doesn’t make sense, then you will need to modify the logical definition.
  • If an existing term contains a logical definition and still shows an asserted is_a parent in the ‘SubClass of’ section, you may delete that asserted parent, as well.
  • Make sure to run the Reasoner to check that the asserted parent is now replaced with the correct reasoned parent(s).
 See Ontology_Editors_Daily_Workflow for commit, push and merge instructions.


Review Status

Last reviewed: June 7, 2018 Back to: Ontology Editing Guide