Adding or Deleting Asserted Subclasses: Difference between revisions

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   See [[Ontology_Editors_Daily_Workflow]] for creating branches and basic Protégé instructions.
   See [[Ontology_Editors_Daily_Workflow]] for creating branches and basic Protégé instructions.


* Asserted '''is_a parents''' do not need to be retained as entries in the '''SubClass of''' section of the Description window in Protege if the logical definition for a term results in their inference.
* Asserted '''is_a parents''' do not need to be retained as entries in the '''SubClass of''' section of the Description window in Protege if the logical definition for a term results in their inference.
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   See [[Ontology_Editors_Daily_Workflow]] for commit, push and merge instructions.
   See [[Ontology_Editors_Daily_Workflow]] for commit, push and merge instructions.


== Review Status ==


== Review Status ==
Last reviewed: May 24, 2017


Last reviewed: June 7, 2018
[[Ontology_Development#Editing_the_Ontology |Back to: Editing the Ontology]]
[http://wiki.geneontology.org/index.php/Ontology_Editing_Guide Back to: Ontology Editing Guide]


[[Category:GO Editors]][[Category:Ontology]][[Category:Editor_Guide_2018]]
[[Category:GO Editors]][[Category:Ontology]][[Category:Editor_Guide_2018]]

Revision as of 10:33, 5 April 2019

 See Ontology_Editors_Daily_Workflow for creating branches and basic Protégé instructions.
  • Asserted is_a parents do not need to be retained as entries in the SubClass of section of the Description window in Protege if the logical definition for a term results in their inference.
  • If you have created a logical definition for your term, you can delete the asserted is_a parent by clicking on the X to the right term.
  • Once you synchronize the Reasoner, you will see the reasoned classification of your new term, including the inferred is_a parent(s).
  • If the inferred classification does not contain the correct parentage, or doesn’t make sense, then you will need to modify the logical definition.
  • If an existing term contains a logical definition and still shows an asserted is_a parent in the ‘SubClass of’ section, you may delete that asserted parent, as well.
  • Make sure to run the Reasoner to check that the asserted parent is now replaced with the correct reasoned parent(s).
 See Ontology_Editors_Daily_Workflow for commit, push and merge instructions.

Review Status

Last reviewed: May 24, 2017

Back to: Editing the Ontology