FP-regulates: Difference between revisions
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== How do I calculate transitive closure? == | == How do I calculate transitive closure? == | ||
See [[ | See [[Transitive_closure]] | ||
Revision as of 17:08, 24 June 2008
Frequently Asked Questions:
Will my parser break?
Your parser or tool should NOT break unless it has been written such that it makes the assumption there are no inter-ontology links.
Even if the parser does not break, tools and databases may behave differently in that they may automatically classify gene products under an MF node where they previously did not.
Can I strip out the interontology links?
We will provide a lightweight script that can do this. In addition, we may deploy a 'dumbed-down' version of the ontology with only is_a and part_of links. This will have the effect of eliminating the inter-ontology regulates links