FlyBase December 2014

1. Staff working on GOC tasks

Susan Tweedie (GO curator) 0.8 FTE

Helen Attrill (GO curator/literature curator) 0.35 FTE

Peter McQuilton (Literature curator)

Steven Marygold (Literature curator)

Gillian Millburn (Literature curator)

Raymund Stefancsik (Literature curator)

Kathleen Falls (Developer)

Andy Schroeder (Developer)

Total number of staff working on GOC tasks approx 1.5 FTE; total funded by NIH GO grant 0.

2. Annotation progress

Table showing progress in annotating Drosophila localized genes Nov 2013 - Nov 2014 (FB2013_06 - FB2014_06)

	Nov 13	Nov 14	% change	% of total genes
Total number of localized genes (excluding pseudogenes)	16457	17382	+5.6%
Localized genes with no GO annotation	4655	4692	+0.8%	27.0%
Localized genes with any GO annotation	11802	12690	+7.5%	73.0%
Localized genes with 1 or more term based on experimental evidence	5786	6095	+18.8%	35.1%
Localized genes with other non-IEA, non-ND evidence	3733	3746	+0.4%	21.5%
Localized genes with only IEA evidence	1270	1074	-15.4%	6.2%
Localized genes with only ND evidence	1013	1775	+75.2%	10.2%

Note there are 13827 predicted protein coding genes in Drosophila (FlyBase release FB2010_09 - November 19th 2010) GO annotation is available for an additional 340 genes that encode RNA products and 2085 genes that are not localised to the genome.

Table showing annotation progress since the start of the Reference Genome project in August 2006

	August 2006	October 2008	November 2009	November 2010	% change since Nov 2009
Experimental evidence	11888	17322	20057	24115	+20.2%
Computational evidence	14946	15487	15493	15493	0%
Author/curator statements	16711	16506	16379	16308	-0.4%
Electronic annotation	22626	16010	14923	15641	+4.8%
No biological data available	4997	5022	4992	5422	+8.6%
Total annotations	71168	70351	71844	76979	+7.1%