FlyBase December 2016: Difference between revisions

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(Created page with "=== 1. Staff working on GOC tasks === Helen Attrill (GO curator/literature curator) 0.3 FTE Giulia Antonazzo (GO curator/literature curator) 0.1 FTE Alix Rey (GO curator/li...")
 
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Josh Goodman (Web Developer)
Josh Goodman (Web Developer)
=== 2. Annotation progress ===
==== Table showing progress in annotating Drosophila localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05) ====
{| border="1"
|-
!
! Nov 14
! Nov 15
! % change
! % of total genes
|-
| Total number of localized genes (excluding pseudogenes) || 17382  || 17406 || +0.14% ||
|-
| Localized genes with no GO annotation || 4692 || 4449 || -5.0% || 25.6%
|-
| Localized genes with any GO annotation || 12690 || 12947 || +2.0% || 74.4%
|-
| Localized genes with 1 or more term based on experimental evidence || 6095 || 9727 || +59.6% || 55.9%
|-
| Localized genes with other non-IEA, non-ND evidence || 3746 || 3830 || +2.2% || 22.0%
|-
| Localized genes with only IEA evidence || 1074 || 991 || -7.7% || 5.7%
|-
| Localized genes with only ND evidence || 1775 || 1840 || +3.7% || 10.6%
|-
|}
==== Table showing total annotation progress for localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05)====
{| border="1"
|-
!
! November 2014
! November 2015
! % change
|-
| GO Biological Process (BP) annotations || 46245 (9471 genes) || 48093 (8360 genes)  || +4.0% (+2.6%)
|-
| GO Molecular Function (MF) annotations || 27872 (9037 genes) || 28273 (9121 genes) ||  +1.4% (+0.9%)
|-
| GO Cellular Component (CC) annotations || 22911 (7959 genes) || 24219 (8360 genes) ||  +5.7% (+5.0%)
|-
| Total annotations for localized genes || 97028 || 100585  || +3.7%
|-
|}

Revision as of 06:30, 19 December 2016

1. Staff working on GOC tasks

Helen Attrill (GO curator/literature curator) 0.3 FTE

Giulia Antonazzo (GO curator/literature curator) 0.1 FTE

Alix Rey (GO curator/literature curator) 0.2 FTE

Steven Marygold (Literature curator) 0.1 FTE

Gillian Millburn (Literature curator) 0.2 FTE

Kathleen Falls (Developer)

Josh Goodman (Web Developer)

2. Annotation progress

Table showing progress in annotating Drosophila localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05)

Nov 14 Nov 15 % change % of total genes
Total number of localized genes (excluding pseudogenes) 17382 17406 +0.14%
Localized genes with no GO annotation 4692 4449 -5.0% 25.6%
Localized genes with any GO annotation 12690 12947 +2.0% 74.4%
Localized genes with 1 or more term based on experimental evidence 6095 9727 +59.6% 55.9%
Localized genes with other non-IEA, non-ND evidence 3746 3830 +2.2% 22.0%
Localized genes with only IEA evidence 1074 991 -7.7% 5.7%
Localized genes with only ND evidence 1775 1840 +3.7% 10.6%

Table showing total annotation progress for localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05)

November 2014 November 2015 % change
GO Biological Process (BP) annotations 46245 (9471 genes) 48093 (8360 genes) +4.0% (+2.6%)
GO Molecular Function (MF) annotations 27872 (9037 genes) 28273 (9121 genes) +1.4% (+0.9%)
GO Cellular Component (CC) annotations 22911 (7959 genes) 24219 (8360 genes) +5.7% (+5.0%)
Total annotations for localized genes 97028 100585 +3.7%