FlyBase December 2016: Difference between revisions
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=== 2. Annotation progress === | === 2. Annotation progress === | ||
==== Table showing progress in annotating Drosophila localized genes Nov | ==== Table showing progress in annotating Drosophila localized genes Nov 2015 - Nov 2016 (FB2015_61 - FB2016_06) ==== | ||
{| border="1" | {| border="1" | ||
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! % of total genes | ! % of total genes | ||
|- | |- | ||
| Total number of localized genes (excluding pseudogenes) || 17382 | | Total number of localized genes (excluding pseudogenes) || 17382 || 17747 || +2.1% || | ||
|- | |- | ||
| Localized genes with no GO annotation || 4692 || | | Localized genes with no GO annotation || 4692 || 4941 || -5.3% || 27.8% | ||
|- | |- | ||
| Localized genes with any GO annotation || 12690 || | | Localized genes with any GO annotation || 12690 || 12806 || +0.9% || 73.0% | ||
|- | |- | ||
| Localized genes with 1 or more term based on experimental evidence || 6095 || | | Localized genes with 1 or more term based on experimental evidence || 6095 || 6724 || +10.3% || 37.8% | ||
|- | |- | ||
| Localized genes with other non-IEA, non-ND evidence || | | Localized genes with other non-IEA, non-ND evidence || 3830 || 2420 || -36.8% || 13.6% | ||
|- | |- | ||
| Localized genes with only IEA evidence || | | Localized genes with only IEA evidence || 991 || 1864 || +88.1% || 10.5% | ||
|- | |- | ||
| Localized genes with only ND evidence || | | Localized genes with only ND evidence || 1840 || 1798 || -2.3% || 10.1% | ||
|- | |- | ||
|} | |} |
Revision as of 07:29, 19 December 2016
1. Staff working on GOC tasks
Helen Attrill (GO curator/literature curator) 0.3 FTE
Giulia Antonazzo (GO curator/literature curator) 0.1 FTE
Alix Rey (GO curator/literature curator) 0.2 FTE
Steven Marygold (Literature curator) 0.1 FTE
Gillian Millburn (Literature curator) 0.2 FTE
Kathleen Falls (Developer)
Josh Goodman (Web Developer)
2. Annotation progress
Table showing progress in annotating Drosophila localized genes Nov 2015 - Nov 2016 (FB2015_61 - FB2016_06)
Nov 14 | Nov 15 | % change | % of total genes | |
---|---|---|---|---|
Total number of localized genes (excluding pseudogenes) | 17382 | 17747 | +2.1% | |
Localized genes with no GO annotation | 4692 | 4941 | -5.3% | 27.8% |
Localized genes with any GO annotation | 12690 | 12806 | +0.9% | 73.0% |
Localized genes with 1 or more term based on experimental evidence | 6095 | 6724 | +10.3% | 37.8% |
Localized genes with other non-IEA, non-ND evidence | 3830 | 2420 | -36.8% | 13.6% |
Localized genes with only IEA evidence | 991 | 1864 | +88.1% | 10.5% |
Localized genes with only ND evidence | 1840 | 1798 | -2.3% | 10.1% |
Table showing total annotation progress for localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05)
November 2014 | November 2015 | % change | |
---|---|---|---|
GO Biological Process (BP) annotations | 46245 (9471 genes) | 48093 (8360 genes) | +4.0% (+2.6%) |
GO Molecular Function (MF) annotations | 27872 (9037 genes) | 28273 (9121 genes) | +1.4% (+0.9%) |
GO Cellular Component (CC) annotations | 22911 (7959 genes) | 24219 (8360 genes) | +5.7% (+5.0%) |
Total annotations for localized genes | 97028 | 100585 | +3.7% |