FlyBase December 2016: Difference between revisions

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=== 2. Annotation progress ===
=== 2. Annotation progress ===


==== Table showing progress in annotating Drosophila localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05) ====
==== Table showing progress in annotating Drosophila localized genes Nov 2015 - Nov 2016 (FB2015_61 - FB2016_06) ====


{| border="1"
{| border="1"
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! % of total genes
! % of total genes
|-
|-
| Total number of localized genes (excluding pseudogenes) || 17382 || 17406 || +0.14% ||  
| Total number of localized genes (excluding pseudogenes) || 17382 || 17747 || +2.1% ||  
|-
|-
| Localized genes with no GO annotation || 4692 || 4449 || -5.0% || 25.6%
| Localized genes with no GO annotation || 4692 || 4941 || -5.3% || 27.8%
|-
|-
| Localized genes with any GO annotation || 12690 || 12947 || +2.0% || 74.4%
| Localized genes with any GO annotation || 12690 || 12806 || +0.9% || 73.0%
|-
|-
| Localized genes with 1 or more term based on experimental evidence || 6095 || 9727 || +59.6% || 55.9%
| Localized genes with 1 or more term based on experimental evidence || 6095 || 6724 || +10.3% || 37.8%
|-
|-
| Localized genes with other non-IEA, non-ND evidence || 3746 || 3830 || +2.2% || 22.0%
| Localized genes with other non-IEA, non-ND evidence || 3830 || 2420 || -36.8% || 13.6%
|-
|-
| Localized genes with only IEA evidence || 1074 || 991 || -7.7% || 5.7%
| Localized genes with only IEA evidence || 991 || 1864 || +88.1% || 10.5%
|-
|-
| Localized genes with only ND evidence || 1775 || 1840 || +3.7% || 10.6%
| Localized genes with only ND evidence || 1840 || 1798 || -2.3% || 10.1%
|-
|-
|}
|}

Revision as of 07:29, 19 December 2016

1. Staff working on GOC tasks

Helen Attrill (GO curator/literature curator) 0.3 FTE

Giulia Antonazzo (GO curator/literature curator) 0.1 FTE

Alix Rey (GO curator/literature curator) 0.2 FTE

Steven Marygold (Literature curator) 0.1 FTE

Gillian Millburn (Literature curator) 0.2 FTE

Kathleen Falls (Developer)

Josh Goodman (Web Developer)

2. Annotation progress

Table showing progress in annotating Drosophila localized genes Nov 2015 - Nov 2016 (FB2015_61 - FB2016_06)

Nov 14 Nov 15 % change % of total genes
Total number of localized genes (excluding pseudogenes) 17382 17747 +2.1%
Localized genes with no GO annotation 4692 4941 -5.3% 27.8%
Localized genes with any GO annotation 12690 12806 +0.9% 73.0%
Localized genes with 1 or more term based on experimental evidence 6095 6724 +10.3% 37.8%
Localized genes with other non-IEA, non-ND evidence 3830 2420 -36.8% 13.6%
Localized genes with only IEA evidence 991 1864 +88.1% 10.5%
Localized genes with only ND evidence 1840 1798 -2.3% 10.1%

Table showing total annotation progress for localized genes Nov 2014 - Nov 2015 (FB2014_06 - FB2015_05)

November 2014 November 2015 % change
GO Biological Process (BP) annotations 46245 (9471 genes) 48093 (8360 genes) +4.0% (+2.6%)
GO Molecular Function (MF) annotations 27872 (9037 genes) 28273 (9121 genes) +1.4% (+0.9%)
GO Cellular Component (CC) annotations 22911 (7959 genes) 24219 (8360 genes) +5.7% (+5.0%)
Total annotations for localized genes 97028 100585 +3.7%