Future newsletter items: Difference between revisions
Line 22: | Line 22: | ||
==Items for future newsletters== | ==Items for future newsletters== | ||
*Midori has suggested we have a whole newsletter devoted to x-products. We haven't yet decided whether this will replace or be in addition to the regular newsletter release. | *Midori has suggested we have a whole newsletter devoted to x-products. We haven't yet decided whether this will replace or be in addition to the regular newsletter release: | ||
Dear newsletter-ers, | |||
I've had an idea for a future newsletter: how about a special issue | |||
devoted entirely to cross-products? Chris has generated a lot of sets to | |||
review lately, and we'll deploy them in the live GO before too long. | |||
Keeping our users fully informed will take more than an ordinary article | |||
in an ordinary newsletter. | |||
Some possible articles: | |||
- What are cross-products, and how do we represent them in GO files? | |||
(Chris?) | |||
- What do we gain by using xps? (Midori & David?) | |||
- What GO terms and other ontologies will be used in xps? (Midori, David, | |||
Chris?) | |||
- What will xps look like in AmiGO? (Seth, Amelia?) (maybe a pretty | |||
screenshot??) | |||
==Items suggested for newsletters, but better somewhere else== | ==Items suggested for newsletters, but better somewhere else== |
Revision as of 11:07, 15 May 2008
Items for May newsletter
- AmiGO release
Starting in March 2008, the following enhancements and new features were made available in AmiGO (http://amigo.geneontology.org), the web application that allows browsing and visualization of the ontologies and annotations from multiple species: Better search interface and results Result ranking More and improved download options Visual enhancements (graphs, bar charts, etc.) Term Enrichment Slimmer
- Orthology establishment for the Reference Genomes MODs genes - Princeton group
(below are leftovers from Feb2008 suggested topics)
- Any topics in Ontology Development?
- Announcement of new disjoint_from tags in gene_ontology.obo file (Jane)
- DO WE REALLY WANT TO DO THIS? There are still a few disjoint violations in the ontology.
- also mention that SO has them now too between the top nodes and between region and junction
Items for future newsletters
- Midori has suggested we have a whole newsletter devoted to x-products. We haven't yet decided whether this will replace or be in addition to the regular newsletter release:
Dear newsletter-ers,
I've had an idea for a future newsletter: how about a special issue devoted entirely to cross-products? Chris has generated a lot of sets to review lately, and we'll deploy them in the live GO before too long. Keeping our users fully informed will take more than an ordinary article in an ordinary newsletter.
Some possible articles:
- What are cross-products, and how do we represent them in GO files? (Chris?)
- What do we gain by using xps? (Midori & David?)
- What GO terms and other ontologies will be used in xps? (Midori, David, Chris?)
- What will xps look like in AmiGO? (Seth, Amelia?) (maybe a pretty screenshot??)
Items suggested for newsletters, but better somewhere else
- Standards for GO data in publications
New task for Group
- Obtain an ISSN for the Newsletter,[1]